CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLLA0_F26961g
(
Kluyveromyces lactis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
KLLA0_F26961g
T120698_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLLA0_F26961g
M01039_2.00
Kluyveromyces lactis
CYCCYTD
HARGGRG
PBM
Siggers et al.(2014)
KLLA0F29691gKlac
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MSN4
M00032_2.00
Saccharomyces cerevisiae
NYCCCYNN
NNRGGGRN
PBM
Badis et al.(2008)
MSN4_2121
0.787
0.826
MSN4
M07462_2.00
Saccharomyces cerevisiae
CCCCT
AGGGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0342.1
0.787
0.826
MSN4
M08533_2.00
Saccharomyces cerevisiae
CCCCT
AGGGG
Misc
DeBoer et al.(2011)
YKL062W_518
0.787
0.826
CAGL0M13189g
M01034_2.00
Candida glabrata
MYCCBBDNN
NNHVVGGRK
PBM
Siggers et al.(2014)
CAGL0M13189gCgla
0.763
0.826
MSN2
M00036_2.00
Saccharomyces cerevisiae
NVCCCCTK
MAGGGGBN
PBM
Badis et al.(2008)
MSN2_2101
0.757
0.783
MSN2
M07466_2.00
Saccharomyces cerevisiae
CCCCY
RGGGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0341.1
0.757
0.783
MSN2
M08538_2.00
Saccharomyces cerevisiae
NHYCCKN
NMGGRDN
Misc
DeBoer et al.(2011)
YMR037C_1380
0.757
0.783
MSN2
M10399_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MSN2_Q4
0.757
0.783
CAGL0F05995g
M01032_2.00
Candida glabrata
NYCCYYNN
NNRRGGRN
PBM
Siggers et al.(2014)
CAGL0F05995gCgla
0.757
0.761
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01039_2.00
C2H2 ZF
81
104
FKCDQCNKTFRRSEHLKRHVRSVH
M01039_2.00
C2H2 ZF
110
132
FHCQFCDKKFSRSDNLSQHLKTH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAG98987
C2H2 ZF
621
644
FKCDQCNKTFRRSEHLKRHVRSVH
CAG98987
C2H2 ZF
650
672
FHCQFCDKKFSRSDNLSQHLKTH
Links
Other
C2H2 ZF
family TFs
Other
Kluyveromyces lactis
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TPHA_0C02580
Tetrapisispora phaffii
TPHA_0C02580
I
0.816
Kwal_8351
Kluyveromyces waltii
Kwal_8351
I
0.805
KLTH0D08734g
Kluyveromyces thermotolerans
KLTH0D08734g
I
0.805
SAKL0B11330g
Lachancea kluyveri
SAKL0B11330g
I
0.805
KLTH0D08734g
Lachancea thermotolerans
KLTH0D08734g
I
0.805
LALA0_S09e05358g
Lachancea lanzarotensis
LALA0_S09e05358g
I
0.805
TBLA_0G01920
Tetrapisispora blattae
TBLA_0G01920
I
0.793
SKUD_158203
Saccharomyces kudriavzevii
SKUD_158203
I
0.787
KNAG_0H00550
Kazachstania naganishii
KNAG_0H00550
I
0.787
NDAI_0C00560
Naumovozyma dairenensis
NDAI_0C00560
I
0.787
Scas_Contig649.28
Saccharomyces castellii
Scas_Contig649.28
I
0.787
SU7_1995
Saccharomyces arboricola
SU7_1995
I
0.787
ZYRO0F01012g
Zygosaccharomyces rouxii
ZYRO0F01012g
I
0.787
ZBAI_03527
Zygosaccharomyces bailii
ZBAI_03527
I
0.787
13440_YKL062W
Saccharomyces mikatae
13440_YKL062W
I
0.787
TDEL_0B06910
Torulaspora delbrueckii
TDEL_0B06910
I
0.787
MSN4
Saccharomyces cerevisiae
YKL062W
D
0.787
NCAS_0H03080
Naumovozyma castellii
NCAS_0H03080
I
0.787
13715_YKL062W
Saccharomyces paradoxus
13715_YKL062W
I
0.787
Scas_Contig649.29
Saccharomyces castellii
Scas_Contig649.29
I
0.787
ZBAI_08525
Zygosaccharomyces bailii
ZBAI_08525
I
0.787
KAFR_0A02320
Kazachstania africana
KAFR_0A02320
I
0.786
TBLA_0H02830
Tetrapisispora blattae
TBLA_0H02830
I
0.786
TPHA_0N01460
Tetrapisispora phaffii
TPHA_0N01460
I
0.781
Kpol_1013p21
Vanderwaltozyma polyspora
Kpol_1013p21
I
0.781
Ecym_2301
Eremothecium cymbalariae
Ecym_2301
I
0.781
AGOS_ABR089C
Ashbya gossypii
AGOS_ABR089C
I
0.781
AACERI_AaceriABR089C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriABR089C
I
0.781
Kpol_185p3
Vanderwaltozyma polyspora
Kpol_185p3
I
0.781
KAFR_0F02070
Kazachstania africana
KAFR_0F02070
I
0.781
KUCA_T00000741001
Kuraishia capsulata
KUCA_T00000741001
I
0.777
PAS_chr2-1_0723
Komagataella pastoris
PAS_chr2-1_0723
I
0.770
XP_002491652.1
Pichia pastoris
XP_002491652.1
I
0.770
NDAI_0B01340
Naumovozyma dairenensis
NDAI_0B01340
I
0.768
CAGL0M13189g
Candida glabrata
CAGL0M13189g
D
0.763
14538_YKL062W
Saccharomyces bayanus
14538_YKL062W
I
0.763
KNAG_0M02310
Kazachstania naganishii
KNAG_0M02310
I
0.763
Scas_Contig709.32
Saccharomyces castellii
Scas_Contig709.32
I
0.761
fgenesh1_pg.C_chr_7.1000062
Pichia stipitis
fgenesh1_pg.C_chr_7.1000062
I
0.761
PGUG_01635
Meyerozyma guilliermondii
PGUG_01635
I
0.761
GNLVRS01_PISO0E05768g
Millerozyma farinosa
GNLVRS01_PISO0E05768g
I
0.761
CLUG_01356
Clavispora lusitaniae
CLUG_01356
I
0.761
CANTEDRAFT_134781
Candida tenuis
CANTEDRAFT_134781
I
0.761
PGUG_01635
Candida guilliermondii
PGUG_01635
I
0.761
GNLVRS01_PISO0F07089g
Millerozyma farinosa
GNLVRS01_PISO0F07089g
I
0.761
DEHA2A08382g
Debaryomyces hansenii
DEHA2A08382g
I
0.761
NCAS_0A12910
Naumovozyma castellii
NCAS_0A12910
I
0.761
PICST_33273
Scheffersomyces stipitis
PICST_33273
I
0.761
CLUG_01356
Candida lusitaniae
CLUG_01356
I
0.761
GLOINDRAFT_82623
Rhizophagus irregularis
GLOINDRAFT_82623
I
0.760
CAGL0F05995g
Candida glabrata
CAGL0F05995g
D
0.757
BN7_2125
Wickerhamomyces ciferrii
BN7_2125
I
0.757
SU7_2517
Saccharomyces arboricola
SU7_2517
I
0.757
17169_YMR037C
Saccharomyces paradoxus
17169_YMR037C
I
0.757
MSN2
Saccharomyces cerevisiae
YMR037C
D
0.757
16548_YMR037C
Saccharomyces mikatae
16548_YMR037C
I
0.757
17588_YMR037C
Saccharomyces bayanus
17588_YMR037C
I
0.757