CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KNAG_0G01140
(
Kazachstania naganishii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
KNAG_0G01140
T120746_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CMR3
M00042_2.00
Saccharomyces cerevisiae
HGTARATCN
NGATYTACD
PBM
Badis et al.(2008)
YPR013C_2104
0.792
0.913
CMR3
M01539_2.00
Saccharomyces cerevisiae
NGATYDRCVN
NBGYHRATCN
PBM
Zhu et al.(2009)
Ypr013c
0.792
0.913
CMR3
M07471_2.00
Saccharomyces cerevisiae
NGATYKRCR
YGYMRATCN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0434.1
0.792
0.913
CMR3
M08545_2.00
Saccharomyces cerevisiae
NNNRVYGTARATCMYDNNNN
NNNNHRKGATYTACRBYNNN
Misc
DeBoer et al.(2011)
YPR013C_859
0.792
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCK71172
C2H2 ZF
455
477
KQCPVCGKICSRPSTLKTHYMIH
CCK71172
C2H2 ZF
483
507
FKCPWEGCNKSFNVKSNMFRHLKSH
Links
Other
C2H2 ZF
family TFs
Other
Kazachstania naganishii
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy