CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Kpol_1003p50
(
Vanderwaltozyma polyspora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Kpol_1003p50
T120768_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CRZ1
M00038_2.00
Saccharomyces cerevisiae
NNDCTRHGCCNN
NNGGCDYAGHNN
PBM
Badis et al.(2008)
CRZ1_4531
0.784
0.868
CRZ1
M07468_2.00
Saccharomyces cerevisiae
NNVMGCCHC
GDGGCKBNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0285.1
0.784
0.868
CRZ1
M08541_2.00
Saccharomyces cerevisiae
NNVMGCCHC
GDGGCKBNN
Misc
DeBoer et al.(2011)
YNL027W_516
0.784
0.868
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO16744
C2H2 ZF
493
515
YACPVCDKKFTRPYNLKSHKRTH
EDO16744
C2H2 ZF
521
543
FSCSQCGKTFAREHDRKRHEDLH
EDO16744
C2H2 ZF
549
579
YVCGGKLKSGESWGCGKRFARSDALGRHFKT
Links
Other
C2H2 ZF
family TFs
Other
Vanderwaltozyma polyspora
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy