CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Kpol_423p15 *(Vanderwaltozyma polyspora)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	Kpol_423p15	T120793_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MIG3 M00023_2.00	Saccharomyces cerevisiae	NNCCCCGCAH	DTGCGGGGNN	PBM Badis et al.(2008) MIG3_2054	0.759	0.783
MIG3 M01529_2.00	Saccharomyces cerevisiae	CYCCRBNNN	NNNVYGGRG	PBM Zhu et al.(2009) Mig3	0.759	0.783
MIG3 M07453_2.00	Saccharomyces cerevisiae	CCCCRCN	NGYGGGG	PBM, CSA and or DIP-chip Mathelier et al.(2014) MA0339.1	0.759	0.783
MIG3 M08520_2.00	Saccharomyces cerevisiae	CCCCRCN	NGYGGGG	Misc DeBoer et al.(2011) YER028C_501	0.759	0.783
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
EDO15225	C2H2 ZF	27	49	YICEICTKGFRRLEHKKRHIRTH
EDO15225	C2H2 ZF	55	79	HVCTFQGCPKSFSRSDELKRHMNIH

Links
Other C2H2 ZF family TFs
Other *Vanderwaltozyma polyspora* TFs