TF Information

OMERI01G06230 *(Oryza meridionalis)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	OMERI01G06230	T124868_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
IDD5 M06807_2.00	Arabidopsis thaliana	DNTTTTGTCKTTTTSYD	HRSAAAAMGACAAAANH	Dap-seq OMalley et al.(2016) IDD5_colamp_a	0.764	0.930
IDD5 M06808_2.00	Arabidopsis thaliana	WTTTTGTCKTTTWSYD	HRSWAAAMGACAAAAW	Dap-seq OMalley et al.(2016) IDD5_col	0.764	0.930
AT1G14580 M06797_2.00	Arabidopsis thaliana	NNNWWTTTTGTCKTTTWSYD	HRSWAAAMGACAAAAWWNNN	Dap-seq OMalley et al.(2016) At1g14580_col_a	0.764	0.884
AT1G14580 M06798_2.00	Arabidopsis thaliana	NNTTTTGTCKTTTWSYD	HRSWAAAMGACAAAANN	Dap-seq OMalley et al.(2016) At1g14580_colamp_a	0.764	0.884
IDD1 M06824_2.00	Arabidopsis thaliana	DNTTTTGTCKTTTWBYD	HRVWAAAMGACAAAANH	Dap-seq OMalley et al.(2016) At5g66730_colamp_a	0.759	0.884
IDD1 M06825_2.00	Arabidopsis thaliana	WDTTTTGTCKTTTWNYD	HRNWAAAMGACAAAAHW	Dap-seq OMalley et al.(2016) At5g66730_col	0.759	0.884
IDD4 M06809_2.00	Arabidopsis thaliana	WWTTTTGTCKTTTWSYD	HRSWAAAMGACAAAAWW	Dap-seq OMalley et al.(2016) IDD4_col_a	0.759	0.860
IDD7 M06803_2.00	Arabidopsis thaliana	NDDTTTTGTCKTTTWBYD	HRVWAAAMGACAAAAHHN	Dap-seq OMalley et al.(2016) IDD7_col_a	0.759	0.860
MGP M06795_2.00	Arabidopsis thaliana	HNHDWTTTTGTCKTTTWNYD	HRNWAAAMGACAAAAWHDND	Dap-seq OMalley et al.(2016) MGP_col_a	0.759	0.860
MGP M06796_2.00	Arabidopsis thaliana	NNDTTTTGTCKTTTWBYD	HRVWAAAMGACAAAAHNN	Dap-seq OMalley et al.(2016) MGP_colamp_a	0.759	0.860
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OMERI01G06230.1	C2H2 ZF	152	173	WKCDKCSKRYAVHSDWKAHSKV
OMERI01G06230.1	C2H2 ZF	172	198	KVCGTREYRCDCGTLFSRRDSFITHRA
OMERI01G06230.2	C2H2 ZF	179	200	WKCDKCSKRYAVHSDWKAHSKV
OMERI01G06230.2	C2H2 ZF	199	225	KVCGTREYRCDCGTLFSRRDSFITHRA
OMERI01G06230.3	C2H2 ZF	152	173	WKCDKCSKRYAVHSDWKAHSKV
OMERI01G06230.3	C2H2 ZF	172	198	KVCGTREYRCDCGTLFSRRDSFITHRA

Links
Other C2H2 ZF family TFs
Other *Oryza meridionalis* TFs

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473 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action

OMERI01G06230 (Oryza meridionalis) C2H2 ZF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

473 Related TFs

Invalid Input OrderBy

OMERI01G06230 **(Oryza meridionalis)
C2H2 ZF**