CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PCH_Pc22g24110
(
Penicillium rubens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PCH_Pc22g24110
T125570_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03184
M01474_2.00
Neurospora crassa
NDNNVATCNN
NNGATBNNHN
PBM
Najafabadi et al.(2015a)
pTH10252
0.793
0.913
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAP99699
C2H2 ZF
233
255
YICRTCHKAFSRPSSLRIHSHSH
CAP99699
C2H2 ZF
261
286
FRCTHAGCGKAFSVRSNMKRHERGCH
Links
Other
C2H2 ZF
family TFs
Other
Penicillium rubens
TFs
121 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy