CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400011873
(
Solanum tuberosum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PGSC0003DMG400011873
T125816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400030986
C2H2 ZF
189
211
YQCEICNKVLKSSQALGSHKTIH
PGSC0003DMT400030986
C2H2 ZF
237
259
HECPFCGKIFGSGQALGGHKRSH
Links
Other
C2H2 ZF
family TFs
Other
Solanum tuberosum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc06g060740.1
Solanum lycopersicum
Solyc06g060740.1
N
0.818
Solyc08g078590.1
Solanum lycopersicum
Solyc08g078590.1
N
0.807
PGSC0003DMG400004763
Solanum tuberosum
PGSC0003DMG400004763
N
0.801