PGSC0003DMG400015167 (Solanum tuberosum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PGSC0003DMG400015167 T125819_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400039224 C2H2 ZF 1135 1158
PGSC0003DMT400039224 C2H2 ZF 1159 1182
PGSC0003DMT400039224 C2H2 ZF 1218 1244
PGSC0003DMT400039226 C2H2 ZF 538 561
PGSC0003DMT400039226 C2H2 ZF 562 585
PGSC0003DMT400039226 C2H2 ZF 591 615
PGSC0003DMT400039226 C2H2 ZF 621 647
PGSC0003DMT400039227 C2H2 ZF 286 309
PGSC0003DMT400039227 C2H2 ZF 310 333
PGSC0003DMT400039227 C2H2 ZF 339 363
PGSC0003DMT400039227 C2H2 ZF 369 395

Links

Other C2H2 ZF family TFs
Other Solanum tuberosum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc03g111590.2 Solanum lycopersicum Solyc03g111590.2 N 0.824
Eucgr.K02763 Eucalyptus grandis Eucgr.K02763 N 0.792
orange1.1g001000m.g Citrus sinensis orange1.1g001000m.g N 0.790
Ciclev10018473m.g Citrus clementina Ciclev10018473m.g N 0.778
TCM_014549 Theobroma cacao TCM_014549 N 0.773
Gorai.006G270100 Gossypium raimondii Gorai.006G270100 N 0.762
Aquca_011_00361 Aquilegia coerulea Aquca_011_00361 N 0.759
POPTR_0012s09390 Populus trichocarpa POPTR_0012s09390 N 0.756
evm.TU.supercontig_4.49 Carica papaya evm.TU.supercontig_4.49 N 0.756