PGTG_07823 (Puccinia graminis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PGTG_07823 T125883_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PGTG_07823
M01454_2.00		 Puccinia graminis
HMMGCCHYHN
NDRDGGCKKD		 PBM
Najafabadi et al.(2015a)
pTH10236		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01454_2.00 C2H2 ZF 51 75
M01454_2.00 C2H2 ZF 81 105
M01454_2.00 C2H2 ZF 111 131

DNA Binding Domains

Protein ID Domain From To Sequence
EFP81574 C2H2 ZF 582 606
EFP81574 C2H2 ZF 612 636
EFP81574 C2H2 ZF 642 662

Links

Other C2H2 ZF family TFs
Other Puccinia graminis TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MELLADRAFT_116699 Melampsora laricipopulina MELLADRAFT_116699 I 0.779