PICST_66679 (Scheffersomyces stipitis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PICST_66679 T126350_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
STP1
M00910_2.00
Saccharomyces cerevisiae
NYACGGCRCN

NGYGCCGTRN
PBM
Gordan et al.(2011)
Stp1
0.757 0.739
STP1
M08414_2.00
Saccharomyces cerevisiae
BGCGGCKB

VMGCCGCV
ChIP-chip
Mathelier et al.(2014)
MA0394.1
0.757 0.739
STP1
M08519_2.00
Saccharomyces cerevisiae
YRCGGCKB

VMGCCGYR
Misc
DeBoer et al.(2011)
YDR463W_660
0.757 0.739
STP1
M10390_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$STP1_01
0.757 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EAZ62887 C2H2 ZF 280 302

Links

Other C2H2 ZF family TFs
Other Scheffersomyces stipitis TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
5271_YDR463W Saccharomyces mikatae 5271_YDR463W I 0.757
5542_YDR463W Saccharomyces paradoxus 5542_YDR463W I 0.757
5582_YDR463W Saccharomyces bayanus 5582_YDR463W I 0.757
AACERI_AaceriAFR461C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR461C I 0.757
AGOS_AFR461C Ashbya gossypii AGOS_AFR461C I 0.757
CAGL0E04312g Candida glabrata CAGL0E04312g I 0.757
CaO19.12426 Candida albicans CaO19.12426 N 0.764
CaO19.4961 Candida albicans CaO19.4961 N 0.764
CD36_12380 Candida dubliniensis CD36_12380 N 0.764
CORT_0D02790 Candida orthopsilosis CORT_0D02790 I 0.827
CTRG_03608 Candida tropicalis CTRG_03608 N 0.774
DEHA2E16478g Debaryomyces hansenii DEHA2E16478g I 0.779
Ecym_1404 Eremothecium cymbalariae Ecym_1404 I 0.757
Ecym_1475 Eremothecium cymbalariae Ecym_1475 I 0.762
estExt_fgenesh1_pg.C_chr_1.20297 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20297 I 0.827
G210_3672 Candida maltosa G210_3672 N 0.776
GNLVRS01_PISO0M20868g Millerozyma farinosa GNLVRS01_PISO0M20868g I 0.779
GNLVRS01_PISO0N21111g Millerozyma farinosa GNLVRS01_PISO0N21111g I 0.779
JL09_g1496 Pichia kudriavzevii JL09_g1496 N 0.813
KAFR_0A06720 Kazachstania africana KAFR_0A06720 I 0.757
KLTH0G05104g Lachancea thermotolerans KLTH0G05104g I 0.757
KLTH0G05104g Kluyveromyces thermotolerans KLTH0G05104g I 0.757
KNAG_0B03350 Kazachstania naganishii KNAG_0B03350 I 0.757
Kpol_1023p63 Vanderwaltozyma polyspora Kpol_1023p63 I 0.757
KUCA_T00002785001 Kuraishia capsulata KUCA_T00002785001 I 0.813
Kwal_18337 Kluyveromyces waltii Kwal_18337 I 0.757
NDAI_0C00690 Naumovozyma dairenensis NDAI_0C00690 I 0.757
SAKL0B05434g Lachancea kluyveri SAKL0B05434g N 0.763
SAKL0G06292g Lachancea kluyveri SAKL0G06292g I 0.757
SKUD_206715 Saccharomyces kudriavzevii SKUD_206715 I 0.757
STP1 Saccharomyces cerevisiae YDR463W D 0.757
SU7_1409 Saccharomyces arboricola SU7_1409 I 0.757
SU7_2774 Saccharomyces arboricola SU7_2774 I 0.757
TDEL_0A04530 Torulaspora delbrueckii TDEL_0A04530 I 0.757
TPHA_0K00210 Tetrapisispora phaffii TPHA_0K00210 I 0.757
YALI0_E24937g Yarrowia lipolytica YALI0_E24937g N 0.777