CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-scrt-1
(
Pristionchus pacificus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PPA13149
T127036_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA13149
C2H2 ZF
233
255
VRCPTCGKAFTRPWLLQNHMRVH
PPA13149
C2H2 ZF
261
283
YACDTCGKAFADKSNLRAHTQTH
PPA13149
C2H2 ZF
289
310
YGCTRCGKSFALKAYLSKHEES
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus pacificus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold654-EXSNAP2012.8
Pristionchus exspectatus
scaffold654-EXSNAP2012.8
N
0.827
PPA13089
Pristionchus pacificus
PPA13089
N
0.827