CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV04_04915
(
Capronia semiimmersa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV04_04915
T127342_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06907
M01889_2.00
Neurospora crassa
YYMGCCHCNN
NNGDGGCKRR
PBM
Weirauch et al.(2014)
pTH9682
0.777
0.862
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW69011
C2H2 ZF
398
422
WVCKFDDCNKKFGRKENIKSHVQTH
KIW69011
C2H2 ZF
428
450
FRCDHCKKCFVRGHDLKRHAKIH
KIW69011
C2H2 ZF
457
476
PCLCGNSFARHDALTRHRQR
Links
Other
C2H2 ZF
family TFs
Other
Capronia semiimmersa
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy