CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
RPRC001305
(
Rhodnius prolixus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
RPRC001305
T127863_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
l(3)neo38
M06177_2.00
Drosophila melanogaster
DMMYVKVCCCCCMMYCCCY
RGGGRKKGGGGGBMBRKKH
B1H
Zhu et al.(2011)
l_3_neo38_SANGER_2.5_FBgn0086910
0.777
0.815
l(3)neo38
M06178_2.00
Drosophila melanogaster
NNHMCCCCHMCCMCN
NGKGGKDGGGGKDNN
B1H
Zhu et al.(2011)
l_3_neo38_SOLEXA_2.5_FBgn0086910
0.777
0.815
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RPRC001305-PA
C2H2 ZF
279
301
YCCPECHMAYPDKSLLEQHLLGH
RPRC001305-PA
C2H2 ZF
307
329
FFCDICGAGLKRKDHLTRHKQSH
RPRC001305-PA
C2H2 ZF
335
357
FVCTVCMKAFKRKEQLTLHFVIH
RPRC001305-PA
C2H2 ZF
363
385
HVCTECGKGFYRKDHLRKHARSH
Links
Other
C2H2 ZF
family TFs
Other
Rhodnius prolixus
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy