CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCHCODRAFT_84749
(
Schizophyllum commune
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SCHCODRAFT_84749
T128400_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_84749
M01184_2.00
Schizophyllum commune
NHSSCCGCW
WGCGGSSDN
PBM
Lambert et al.(2019)
pTH11140
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01184_2.00
C2H2 ZF
51
76
LKCHYPGCDAHFSRQHDRMRHEVNKH
M01184_2.00
C2H2 ZF
82
103
FTCDTCRRFFSNASTLERHRCT
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFI99462
C2H2 ZF
226
251
LKCHYPGCDAHFSRQHDRMRHEVNKH
EFI99462
C2H2 ZF
257
278
FTCDTCRRFFSNASTLERHRCT
Links
Other
C2H2 ZF
family TFs
Other
Schizophyllum commune
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCHCODRAFT_233354
Schizophyllum commune
SCHCODRAFT_233354
I
0.790