SINV25082 (Solenopsis invicta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SINV25082 T128917_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
klu
M03680_2.00
Drosophila melanogaster
HCCRCCCACGCAH

DTGCGTGGGYGGD
SELEX
Nitta et al.(2015)
klu_1
0.805 0.913
klu
M03681_2.00
Drosophila melanogaster
YMCGCCCMCGCAH

DTGCGKGGGCGKR
SELEX
Nitta et al.(2015)
klu_2
0.805 0.913
klu
M06114_2.00
Drosophila melanogaster
MCACCCMCRCA

TGYGKGGGTGK
B1H
Zhu et al.(2011)
klu_SANGER_10_FBgn0013469
0.805 0.913
klu
M06115_2.00
Drosophila melanogaster
NNNNMCACCCMCRCN

NGYGKGGGTGKNNNN
B1H
Zhu et al.(2011)
klu_SOLEXA_5_FBgn0013469
0.805 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV25082-PA C2H2 ZF 391 414
SINV25082-PA C2H2 ZF 427 449
SINV25082-PA C2H2 ZF 455 477
SINV25082-PA C2H2 ZF 483 505

Links

Other C2H2 ZF family TFs
Other Solenopsis invicta TFs

Invalid Input OrderBy

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action