CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g078970.1
(
Solanum lycopersicum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Solyc10g078970.1
T129389_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP5
M01851_2.00
Arabidopsis thaliana
DSWTNNNN
NNNNAWSH
PBM
Weirauch et al.(2014)
pTH7539
0.812
0.696
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g078970.1.1
C2H2 ZF
79
101
YECYYCFRSFPTSQALGGHQNAH
Links
Other
C2H2 ZF
family TFs
Other
Solanum lycopersicum
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy