SPU_010542 (Strongylocentrotus purpuratus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SPU_010542 T129587_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Glis2
M00129_2.00
Mus musculus
NKACCCCYYNN

NNRRGGGGTMN
PBM
Badis et al.(2009)
Glis2_1757
0.785 0.928
GLIS2
M02887_2.00
Homo sapiens
KACCCCCCRCRDHG

CDHYGYGGGGGGTM
SELEX
Jolma et al.(2013)
GLIS2_1
0.785 0.928
GLIS2
M04449_2.00
Homo sapiens
RCCCCCCRCRWHGH

DCDWYGYGGGGGGY
SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX
0.785 0.928
GLIS2
M04450_2.00
Homo sapiens
DCWHYGYDGGGGGT

ACCCCCHRCRDWGH
SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX
0.785 0.928
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_010542-tr C2H2 ZF 5 27
SPU_010542-tr C2H2 ZF 33 57
SPU_010542-tr C2H2 ZF 63 87

Links

Other C2H2 ZF family TFs
Other Strongylocentrotus purpuratus TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL011825 Aedes aegypti AAEL011825 I 0.000
GB54493 Apis mellifera GB54493 I 0.000
ACEP12067 Atta cephalotes ACEP12067 I 0.000
CLEC009101 Cimex lectularius CLEC009101 I 0.000
GF16518 Drosophila ananassae FBgn0093539 I 0.000
GG19993 Drosophila erecta FBgn0112192 I 0.000
GH18248 Drosophila grimshawi FBgn0125716 I 0.000
ss Drosophila melanogaster FBgn0003513 D 0.000
GI23647 Drosophila mojavensis FBgn0146373 I 0.000
GL22243 Drosophila persimilis FBgn0159835 I 0.000
GA20013 Drosophila pseudoobscura FBgn0080009 I 0.000
GJ23490 Drosophila virilis FBgn0210588 I 0.000
GK13504 Drosophila willistoni FBgn0215512 I 0.000
GE26316 Drosophila yakuba FBgn0243346 I 0.000
ECANG7_00235 Echinococcus canadensis ECANG7_00235 I 0.000
EmuJ_000434100 Echinococcus multilocularis EmuJ_000434100 I 0.000
ECPE_0000485601 Echinostoma caproni ECPE_0000485601 I 0.000
Hsal_00743--XP_394737.3_APIME Harpegnathos saltator Hsal_00743--XP_394737.3_APIME I 0.000
HMEL007610 Heliconius melpomene HMEL007610 I 0.000
TTAC_0000255601 Hydatigera taeniaeformis TTAC_0000255601 I 0.000
HmN_000855200 Hymenolepis microstoma HmN_000855200 I 0.000
HNAJ_0001000501 Hymenolepis nana HNAJ_0001000501 I 0.000
ISCW019892 Ixodes scapularis ISCW019892 I 0.000
ENSLOCG00000011345 Lepisosteus oculatus ENSLOCG00000011345 N 0.000
LDEC011571 Leptinotarsa decemlineata LDEC011571 I 0.000
LCUP007701 Lucilia cuprina LCUP007701 I 0.000
MCINX002971 Melitaea cinxia MCINX002971 I 0.000
MDOA012868 Musca domestica MDOA012868 I 0.000
NV14135 Nasonia vitripennis NV14135 I 0.000
Ogr18615 Ophisaurus gracilis Ogr18615 N 0.000
ENSOANG00000009611 Ornithorhynchus anatinus ENSOANG00000009611 N 0.000
PHUM298050 Pediculus humanus PHUM298050 I 0.000
PXEA_0000742401 Protopolystoma xenopodis PXEA_0000742401 I 0.000
RPRC012076 Rhodnius prolixus RPRC012076 I 0.000
SMAR001354 Strigamia maritima SMAR001354 I 0.000
TsM_000000500 Taenia solium TsM_000000500 I 0.000
tetur03g01600 Tetranychus urticae tetur03g01600 N 0.000
TC011105 Tribolium castaneum TC011105 I 0.000
L798_12532 Zootermopsis nevadensis L798_12532 I 0.000