ham-2 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00001821 T131556_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ham-2
M00612_2.00		 Caenorhabditis elegans
NNGCTWNNN
NNNWAGCNN		 PBM
Narasimhan et al.(2015)
pTH9149		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00612_2.00 C2H2 ZF 16 39
M00612_2.00 C2H2 ZF 43 66
M00612_2.00 C2H2 ZF 72 93

DNA Binding Domains

Protein ID Domain From To Sequence
C07A12.1a C2H2 ZF 16 39
C07A12.1a C2H2 ZF 43 66
C07A12.1a C2H2 ZF 72 93
C07A12.1b C2H2 ZF 16 39
C07A12.1b C2H2 ZF 43 66
C07A12.1b C2H2 ZF 72 93

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE00807 Caenorhabditis remanei CRE00807 I 0.827
CJA10643 Caenorhabditis japonica CJA10643 I 0.827
CBG14489 Caenorhabditis briggsae CBG14489 I 0.827
CBN22430 Caenorhabditis brenneri CBN22430 I 0.825