CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ztf-2
(
Caenorhabditis elegans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
WBGene00008762
T131580_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in pharynx; rectum; and reproductive system. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-2
M01866_2.00
Caenorhabditis elegans
NYWGRAMCHN
NDGKTYCWRN
PBM
Weirauch et al.(2014)
pTH9049
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01866_2.00
C2H2 ZF
51
72
TCSTCGYQGKWVSEMIRHKRVH
M01866_2.00
C2H2 ZF
78
101
FKCRYCSRTSKWKADLIRHVAKTH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F13G3.1
C2H2 ZF
88
109
TCSTCGYQGKWVSEMIRHKRVH
F13G3.1
C2H2 ZF
115
138
FKCRYCSRTSKWKADLIRHVAKTH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis elegans
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy