ztf-6 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00012317 T131601_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable chromatin insulator sequence binding activity. Involved in asymmetric stem cell division; cell fate specification; and positive regulation of gene expression. Predicted to be active in chromosome. Is expressed in several structures, including V cell; head muscle; hypodermis; neurons; and postdeirid sensillum. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-6
M00631_2.00		 Caenorhabditis elegans
NNDCTDDAAN
NTTHHAGHNN		 PBM
Narasimhan et al.(2015)
pTH9958		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00631_2.00 C2H2 ZF 51 75
M00631_2.00 C2H2 ZF 80 102
M00631_2.00 C2H2 ZF 108 129

DNA Binding Domains

Protein ID Domain From To Sequence
W06H12.1 C2H2 ZF 359 383
W06H12.1 C2H2 ZF 388 410
W06H12.1 C2H2 ZF 416 437

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

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6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action