slr-2 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00013350 T131609_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
slr-2
M00634_2.00		 Caenorhabditis elegans
RACTRCAA
TTGYAGTY		 PBM
Narasimhan et al.(2015)
pTH10040		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00634_2.00 C2H2 ZF 46 68
M00634_2.00 C2H2 ZF 74 97
M00634_2.00 C2H2 ZF 105 128
M00634_2.00 C2H2 ZF 135 159

DNA Binding Domains

Protein ID Domain From To Sequence
Y59A8B.13a C2H2 ZF 46 68
Y59A8B.13a C2H2 ZF 105 128
Y59A8B.13a C2H2 ZF 135 159
Y59A8B.13b C2H2 ZF 46 68
Y59A8B.13b C2H2 ZF 74 97
Y59A8B.13b C2H2 ZF 105 128
Y59A8B.13b C2H2 ZF 135 159
Y59A8B.13c C2H2 ZF 46 68
Y59A8B.13c C2H2 ZF 105 128
Y59A8B.13c C2H2 ZF 135 159
Y59A8B.13d C2H2 ZF 46 68
Y59A8B.13d C2H2 ZF 105 128
Y59A8B.13d C2H2 ZF 135 159

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

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3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action