slr-2 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00013350 T131609_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
slr-2
M00634_2.00
Caenorhabditis elegans
RACTRCAA

TTGYAGTY
PBM
Narasimhan et al.(2015)
pTH10040
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00634_2.00 C2H2 ZF 46 68
M00634_2.00 C2H2 ZF 74 97
M00634_2.00 C2H2 ZF 105 128
M00634_2.00 C2H2 ZF 135 159

DNA Binding Domains

Protein ID Domain From To Sequence
Y59A8B.13a C2H2 ZF 46 68
Y59A8B.13a C2H2 ZF 105 128
Y59A8B.13a C2H2 ZF 135 159
Y59A8B.13b C2H2 ZF 46 68
Y59A8B.13b C2H2 ZF 74 97
Y59A8B.13b C2H2 ZF 105 128
Y59A8B.13b C2H2 ZF 135 159
Y59A8B.13c C2H2 ZF 46 68
Y59A8B.13c C2H2 ZF 105 128
Y59A8B.13c C2H2 ZF 135 159
Y59A8B.13d C2H2 ZF 46 68
Y59A8B.13d C2H2 ZF 105 128
Y59A8B.13d C2H2 ZF 135 159

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AFUA_6G07130 Aspergillus fumigatus CADAFUAG00002271 N 0.000
AFUA_7G04170 Aspergillus fumigatus CADAFUAG00009404 N 0.000
ANIA_05691 Aspergillus nidulans CADANIAG00003374 I 0.000
ATEG_04297 Aspergillus terreus CADATEAG00009296 N 0.000
CADAFLAG00000127 Aspergillus flavus CADAFLAG00000127 N 0.000
CADANGAG00010600 Aspergillus niger CADANGAG00010600 N 0.000
CSUB01_07726 Colletotrichum sublineola CSUB01_07726 N 0.000
EURHEDRAFT_460772 Aspergillus ruber EURHEDRAFT_460772 N 0.000
FGRRES_16927 Fusarium graminearum FGRRES_16927 N 0.000
FPSE_04457 Fusarium pseudograminearum FPSE_04457 N 0.000
GNLVRS01_PISO0I00844g Millerozyma farinosa GNLVRS01_PISO0I00844g N 0.000
GNLVRS01_PISO0I18070g Millerozyma farinosa GNLVRS01_PISO0I18070g N 0.000
GNLVRS01_PISO0J19831g Millerozyma farinosa GNLVRS01_PISO0J19831g N 0.000
PGUG_00594 Meyerozyma guilliermondii PGUG_00594 N 0.000
PGUG_00594 Candida guilliermondii PGUG_00594 N 0.000
PGUG_05832 Candida guilliermondii PGUG_05832 I 0.000
PGUG_05832 Meyerozyma guilliermondii PGUG_05832 I 0.000
PV05_01409 Exophiala xenobiotica PV05_01409 N 0.000
PV06_04157 Exophiala oligosperma PV06_04157 N 0.000
PV07_01614 Cladophialophora immunda PV07_01614 I 0.000
PV09_05539 Verruconis gallopava PV09_05539 N 0.000
PVAR5_1869 Byssochlamys spectabilis PVAR5_1869 N 0.000
SAPIO_CDS4479 Scedosporium apiospermum SAPIO_CDS4479 I 0.000
UCREL1_7241 Eutypa lata UCREL1_7241 N 0.000
V565_080510 Rhizoctonia solani V565_080510 N 0.000
Z517_09549 Fonsecaea pedrosoi Z517_09549 N 0.000
Z518_00888 Rhinocladiella mackenziei Z518_00888 N 0.000
ZBAI_02843 Zygosaccharomyces bailii ZBAI_02843 I 0.000
ZBAI_09101 Zygosaccharomyces bailii ZBAI_09101 I 0.000