CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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YQE_02130
(
Dendroctonus ponderosae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
YQE_02130
T131887_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS1
M02911_2.00
Homo sapiens
MGACCCCCCACGWHGN
NCDWCGTGGGGGGTCK
SELEX
Jolma et al.(2013)
GLIS1_1
0.802
0.868
GLIS1
M04564_2.00
Homo sapiens
BMCCCCCCRCVDHSH
DSDHBGYGGGGGGKV
SELEX
Yin et al.(2017)
GLIS1_eDBD_HT-SELEX
0.802
0.868
GLIS1
M08345_2.00
Homo sapiens
SNSYSYRGGRGGBV
BVCCYCCYRSRSNS
ChIP-seq
Schmitges et al.(2016)
Q8NBF1.MEME
0.802
0.868
GLIS1
M04565_2.00
Homo sapiens
DCWHNGTGGGGGGTV
BACCCCCCACNDWGH
SELEX
Yin et al.(2017)
GLIS1_eDBD_Methyl-HT-SELEX
0.802
0.868
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENN81437
C2H2 ZF
20
47
FTCYWEHCPRKTKPFNARYKLLIHMRVH
ENN81437
C2H2 ZF
71
97
VCFLLQFKGCNKAFSRLENLKIHQRSH
ENN81437
C2H2 ZF
103
127
YLCQFTGCSKCFSNSSDRAKHQRTH
ENN81437
C2H2 ZF
133
157
YACQVMGCLKKYTDPSSLRKHVKNH
Links
Other
C2H2 ZF
family TFs
Other
Dendroctonus ponderosae
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy