CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aan_R004053
(
Calypte anna
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Aan_R004053
T132535_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.769
0.930
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.769
0.930
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.769
0.930
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.769
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aan_R004053
C2H2 ZF
316
341
QVCRWIDCSATYDQQDELVRHIEKTH
Aan_R004053
C2H2 ZF
350
377
FTCFWAGCVRRYKPFNARYKLLIHMRVH
Aan_R004053
C2H2 ZF
384
407
KCMFEGCNKAFSRLENLKIHLRSH
Aan_R004053
C2H2 ZF
413
437
YLCQHPGCQKAFSNSSDRAKHQRTH
Aan_R004053
C2H2 ZF
443
467
YACQIPGCSKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Calypte anna
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy