CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Afo_R016063
(
Aptenodytes forsteri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Afo_R016063
T132950_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.818
0.982
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.818
0.982
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.818
0.982
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.818
0.982
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Afo_R016063
C2H2 ZF
368
391
CRWVDCGALYDQQEELVRHIEKIH
Afo_R016063
C2H2 ZF
400
427
FTCFWAGCPRRYKPFNARYKLLIHMRVH
Afo_R016063
C2H2 ZF
434
457
KCTFEGCKKAFSRLENLKIHLRSH
Afo_R016063
C2H2 ZF
463
487
YLCQHTGCQKAFSNSSDRAKHQRTH
Afo_R016063
C2H2 ZF
493
517
YACQIPGCTKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Aptenodytes forsteri
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy