Alligator_sinensis_CCG003245.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG003245.1 T133008_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB7A
M02914_2.00 		Homo sapiens
NRCGACCACCNV
BNGGTGGTCGYN		 SELEX
Jolma et al.(2013)
ZBTB7A_1 		0.827 0.989
ZBTB7A
M04579_2.00 		Homo sapiens
DCGACCMCCVH
DBGGKGGTCGH		 SELEX
Yin et al.(2017)
ZBTB7A_eDBD_HT-SELEX 		0.827 0.989
ZBTB7A
M08095_2.00 		Homo sapiens
NBSRCTTCCGGNN
NNCCGGAAGYSVN		 ChIP-seq
Mathelier et al.(2014)
MA0750.2 		0.827 0.989
ZBTB7A
M07937_2.00 		Homo sapiens
SNVVGMCCCYNNSBS
SVSNNRGGGKCBBNS		 ChIP-seq
Gerstein et al.(2012)
K562_ZBTB7A_HudsonAlpha 		0.827 0.989
ZBTB7A
M08926_2.00 		Homo sapiens
VVGMCCCYB
VRGGGKCBB		 Misc
Kulakovskiy et al.(2013)
ZBT7A_HUMAN.H11MO.0.A 		0.827 0.989
Zbtb7a
M08991_2.00 		Mus musculus
VVGMCCCYB
VRGGGKCBB		 Misc
Kulakovskiy et al.(2013)
ZBT7A_MOUSE.H11MO.0.B 		0.827 0.989
ZBTB7A
M10273_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRF_Q2 		0.827 0.989
ZBTB7A
M10274_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRF_Q3 		0.827 0.989
ZBTB7A
M10275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LRF_Q6 		0.827 0.989
ZBTB7A
M10276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBTB7A_02 		0.827 0.989
ZBTB7A
M10277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBTB7A_03 		0.827 0.989
ZBTB7A
M04580_2.00 		Homo sapiens
DCGACCACCNH
DNGGTGGTCGH		 SELEX
Yin et al.(2017)
ZBTB7A_eDBD_Methyl-HT-SELEX 		0.827 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG003245.1 C2H2 ZF 220 242
Alligator_sinensis_CCG003245.1 C2H2 ZF 248 270
Alligator_sinensis_CCG003245.1 C2H2 ZF 276 298
Alligator_sinensis_CCG003245.1 C2H2 ZF 304 325

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPANG00000010574 Papio anubis ENSPANG00000010574 I 0.827
ENSPSIG00000017106 Pelodiscus sinensis ENSPSIG00000017106 I 0.827
ZBTB7A Otolemur garnettii ENSOGAG00000033963 I 0.827
ENSNLEG00000003007 Nomascus leucogenys ENSNLEG00000003007 I 0.827
ENSMPUG00000004703 Mustela putorius furo ENSMPUG00000004703 I 0.827
Zbtb7a Mus musculus ENSMUSG00000035011 D 0.827
ZBTB7A Pan troglodytes ENSPTRG00000010292 I 0.827
Zbtb7a Rattus norvegicus ENSRNOG00000020161 I 0.827
ENSBTAP00000035733-D1 Bos grunniens ENSBTAP00000035733-D1 I 0.827
Myotis_brandtii_ZBTB7A_10016304 Myotis brandtii Myotis_brandtii_ZBTB7A_10016304 I 0.827
Cmyd_10015601 Chelonia mydas Cmyd_10015601 I 0.827
ZBTB7A Tursiops truncatus ENSTTRG00000006780 I 0.827
ZBTB7A Sus scrofa ENSSSCG00000029236 I 0.827
ENSMMUG00000019103 Macaca mulatta ENSMMUG00000019103 I 0.827
ZBTB7A Ornithorhynchus anatinus ENSOANG00000006290 I 0.827
ZBTB7A Callithrix jacchus ENSCJAG00000036210 I 0.827
ZBTB7A Homo sapiens ENSG00000178951 D 0.827
ENSFALG00000000874 Ficedula albicollis ENSFALG00000000874 I 0.827
ZBTB7A Myotis lucifugus ENSMLUG00000008667 I 0.827
ENSCSAG00000010775 Chlorocebus sabaeus ENSCSAG00000010775 I 0.827
ENSCPOG00000024829 Cavia porcellus ENSCPOG00000024829 I 0.827
ZBTB7A Canis familiaris ENSCAFG00000024335 I 0.827
ZBTB7A Bos taurus ENSBTAG00000020117 I 0.827
ZBTB7A Pteropus vampyrus ENSPVAG00000017500 I 0.825
ZBTB7A Monodelphis domestica ENSMODG00000000778 I 0.825
ENSMEUG00000005804 Macropus eugenii ENSMEUG00000005804 I 0.825
Ogr12162 Ophisaurus gracilis Ogr12162 I 0.825
Pvit_09830 Pogona vitticeps Pvit_09830 I 0.825
ENSAPLG00000011008 Anas platyrhynchos ENSAPLG00000011008 I 0.825
zbtb7a Takifugu rubripes ENSTRUG00000017896 I 0.820
ENSXMAG00000012740 Xiphophorus maculatus ENSXMAG00000012740 I 0.820
zbtb7a Tetraodon nigroviridis ENSTNIG00000004415 I 0.820
zbtb7a Danio rerio ENSDARG00000039899 I 0.820
ENSGMOG00000008925 Gadus morhua ENSGMOG00000008925 I 0.820
ENSLOCG00000005993 Lepisosteus oculatus ENSLOCG00000005993 I 0.820
ENSAMXG00000017946 Astyanax mexicanus ENSAMXG00000017946 I 0.820
zbtb7a Gasterosteus aculeatus ENSGACG00000012730 I 0.820
ENSPFOG00000001889 Poecilia formosa ENSPFOG00000001889 I 0.820
ENSONIG00000004814 Oreochromis niloticus ENSONIG00000004814 I 0.820
ENSOARG00000010857 Ovis aries ENSOARG00000010857 I 0.815
ENSSHAG00000008804 Sarcophilus harrisii ENSSHAG00000008804 I 0.757