Cmyd_10007335 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10007335 T134302_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zbtb3
M00152_2.00
Mus musculus
MRCTGSHNN

NNDSCAGYK
PBM
Badis et al.(2009)
Zbtb3_1048
0.827 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10007335 C2H2 ZF 398 419
Cmyd_10007335 C2H2 ZF 425 448

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
DREB1A Oryza indica BGIOSGA029415 I 0.000
DREB1H Oryza indica BGIOSGA029416 I 0.000
BRADI1G49560 Brachypodium distachyon BRADI1G49560 I 0.000
BRADI2G60340 Brachypodium distachyon BRADI2G60340 I 0.000
BRADI3G57360 Brachypodium distachyon BRADI3G57360 I 0.000
BRADI4G35580 Brachypodium distachyon BRADI4G35580 I 0.000
BRADI4G35610 Brachypodium distachyon BRADI4G35610 I 0.000
BRADI4G35630 Brachypodium distachyon BRADI4G35630 I 0.000
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.000
F775_27111 Aegilops tauschii F775_27111 I 0.000
GRMZM2G069126 Zea mays GRMZM2G069126 I 0.000
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.000
GRMZM2G124011 Zea mays GRMZM2G124011 I 0.000
GRMZM2G124037 Zea mays GRMZM2G124037 I 0.000
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.000
OBART09G16810 Oryza barthii OBART09G16810 I 0.000
OBART09G16830 Oryza barthii OBART09G16830 I 0.000
OGLUM09G17420 Oryza glumaepatula OGLUM09G17420 I 0.000
OGLUM09G17430 Oryza glumaepatula OGLUM09G17430 I 0.000
OMERI09G12480 Oryza meridionalis OMERI09G12480 I 0.000
OMERI09G12490 Oryza meridionalis OMERI09G12490 I 0.000
ONIVA09G17890 Oryza nivara ONIVA09G17890 I 0.000
ONIVA09G17900 Oryza nivara ONIVA09G17900 I 0.000
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.000
OPUNC09G15280 Oryza punctata OPUNC09G15280 I 0.000
OPUNC09G15290 Oryza punctata OPUNC09G15290 I 0.000
ORGLA08G0220100 Oryza glaberrima ORGLA08G0220100 I 0.000
ORGLA09G0133100 Oryza glaberrima ORGLA09G0133100 I 0.000
ORUFI09G18200 Oryza rufipogon ORUFI09G18200 I 0.000
ORUFI09G18210 Oryza rufipogon ORUFI09G18210 I 0.000
DREB1H Oryza sativa OS09G0522100 I 0.000
DREB1A Oryza sativa OS09G0522200 D 0.000
Pavir.Ba01280 Panicum virgatum Pavir.Ba01280 I 0.000
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I 0.000
Pavir.Fb02246 Panicum virgatum Pavir.Fb02246 I 0.000
Pavir.J03891 Panicum virgatum Pavir.J03891 I 0.000
Pavir.J03892 Panicum virgatum Pavir.J03892 I 0.000
Pavir.J03893 Panicum virgatum Pavir.J03893 I 0.000
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.000
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D 0.000
Sb02g030300 Sorghum bicolor Sb02g030300 I 0.000
Sb02g030310 Sorghum bicolor Sb02g030310 I 0.000
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.000
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.000
Sb02g030340 Sorghum bicolor Sb02g030340 I 0.000
Sb05g006275 Sorghum bicolor Sb05g006275 I 0.000
Si030869m.g Setaria italica Si030869m.g I 0.000
Si030998m.g Setaria italica Si030998m.g I 0.000
Si031001m.g Setaria italica Si031001m.g I 0.000
Traes_5BL_D16B19610 Triticum aestivum Traes_5BL_D16B19610 I 0.000