Cmyd_10009615 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10009615 T134339_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF148
M10238_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CACCCBINDINGFACTOR_Q6
0.827 1.000
ZNF148
M10239_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4_01
0.827 1.000
ZNF148
M10240_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZBP89_Q4
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10009615 C2H2 ZF 220 242
Cmyd_10009615 C2H2 ZF 276 298
Cmyd_10009615 C2H2 ZF 304 326
Cmyd_10009615 C2H2 ZF 332 355

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003668 Calypte anna Aan_R003668 I 0.827
Aan_R014758 Calypte anna Aan_R014758 I 0.759
Afo_R004007 Aptenodytes forsteri Afo_R004007 I 0.759
Afo_R008251 Aptenodytes forsteri Afo_R008251 I 0.827
Alligator_sinensis_CCG011250.1 Alligator sinensis Alligator_sinensis_CCG011250.1 I 0.759
Alligator_sinensis_CCG014066.1 Alligator sinensis Alligator_sinensis_CCG014066.1 I 0.815
Brh_R001493 Buceros rhinoceros Brh_R001493 I 0.827
Brh_R005182 Buceros rhinoceros Brh_R005182 I 0.759
Cmyd_10021057 Chelonia mydas Cmyd_10021057 I 0.759
ENSAMEG00000004258 Ailuropoda melanoleuca ENSAMEG00000004258 I 0.827
ENSAMXG00000006043 Astyanax mexicanus ENSAMXG00000006043 I 0.813
ENSAPLG00000008859 Anas platyrhynchos ENSAPLG00000008859 I 0.827
ENSDORG00000003955 Dipodomys ordii ENSDORG00000003955 I 0.827
ENSFALG00000013520 Ficedula albicollis ENSFALG00000013520 I 0.827
ENSFALG00000014467 Ficedula albicollis ENSFALG00000014467 I 0.759
ENSLACG00000006364 Latimeria chalumnae ENSLACG00000006364 I 0.815
ENSLOCG00000002769 Lepisosteus oculatus ENSLOCG00000002769 I 0.822
ENSMPUG00000004162 Mustela putorius furo ENSMPUG00000004162 I 0.827
ENSNLEG00000000773 Nomascus leucogenys ENSNLEG00000000773 I 0.827
ENSOARG00000020237 Ovis aries ENSOARG00000020237 I 0.827
ENSONIG00000004240 Oreochromis niloticus ENSONIG00000004240 I 0.822
ENSP00000420448 Macaca fascicularis ENSP00000420448 I 0.827
ENSP00000420448-D1 Bos grunniens ENSP00000420448-D1 I 0.827
ENSPANG00000004284 Papio anubis ENSPANG00000004284 I 0.827
ENSPFOG00000004115 Poecilia formosa ENSPFOG00000004115 I 0.822
ENSPPYG00000013462 Pongo abelii ENSPPYG00000013462 I 0.827
ENSPSIG00000003614 Pelodiscus sinensis ENSPSIG00000003614 I 0.827
ENSSHAG00000013855 Sarcophilus harrisii ENSSHAG00000013855 I 0.827
ENSSTOG00000027082 Ictidomys tridecemlineatus ENSSTOG00000027082 I 0.827
Gfo_R001184 Geospiza fortis Gfo_R001184 I 0.827
Gfo_R006633 Geospiza fortis Gfo_R006633 I 0.759
Ogr00130 Ophisaurus gracilis Ogr00130 I 0.762
Pvit_03082 Pogona vitticeps Pvit_03082 I 0.815
Pvit_14619 Pogona vitticeps Pvit_14619 I 0.759
Tal_R010113 Tyto alba Tal_R010113 I 0.759
Tal_R010256 Tyto alba Tal_R010256 I 0.827
Zfp148 Mus musculus ENSMUSG00000022811 I 0.827
Zfp148 Rattus norvegicus ENSRNOG00000001789 I 0.827
ZNF148 Canis familiaris ENSCAFG00000012574 I 0.827
ZNF148 Equus caballus ENSECAG00000013557 I 0.827
ZNF148 Dasypus novemcinctus ENSDNOG00000000280 I 0.827
ZNF148 Callithrix jacchus ENSCJAG00000006741 I 0.827
ZNF148 Bos taurus ENSBTAG00000040031 I 0.827
ZNF148 Homo sapiens ENSG00000163848 D 0.827
znf148 Danio rerio ENSDARG00000055106 I 0.810
ZNF148 Anolis carolinensis ENSACAG00000010047 I 0.815
znf148 Xenopus tropicalis XB-GENE-996852 I 0.815
ZNF148 Echinops telfairi ENSETEG00000002856 I 0.827
ZNF148 Felis catus ENSFCAG00000026852 I 0.827
ZNF148 Pteropus vampyrus ENSPVAG00000006133 I 0.827
znf148 Oryzias latipes ENSORLG00000015950 I 0.810
ZNF148 Loxodonta africana ENSLAFG00000016025 I 0.827
ZNF148 Gallus gallus ENSGALG00000012049 I 0.827
ZNF148 Ochotona princeps ENSOPRG00000010519 I 0.772
ZNF148 Otolemur garnettii ENSOGAG00000013652 I 0.827
ZNF148 Sorex araneus ENSSARG00000007257 I 0.827
ZNF148 Sus scrofa ENSSSCG00000011858 I 0.827
ZNF148 Tupaia belangeri ENSTBEG00000008435 I 0.827
ZNF148 Taeniopygia guttata ENSTGUG00000004010 I 0.827
ZNF148 Monodelphis domestica ENSMODG00000018374 I 0.827
znf148 Takifugu rubripes ENSTRUG00000006270 I 0.810
ZNF148 Tursiops truncatus ENSTTRG00000014714 I 0.827
ZNF148 Macaca mulatta ENSMMUG00000001169 I 0.827
ZNF281 Anolis carolinensis ENSACAG00000006286 I 0.759
ZNF281 Taeniopygia guttata ENSTGUG00000004438 I 0.759
ZNF281 Ornithorhynchus anatinus ENSOANG00000004857 I 0.759