ENSBTAP00000000691-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000000691-D1 T134484_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF684
M04428_2.00
Homo sapiens
NBACAGTCCACCCCTTDV

BHAAGGGGTGGACTGTVN
SELEX
Yin et al.(2017)
ZNF684_FL_HT-SELEX
0.766 0.903
ZNF684
M07574_2.00
Homo sapiens
CWCCCCTTK

MAAGGGGWG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF684.RCADE.ReprocessedData
0.766 0.903
ZNF684
M08240_2.00
Homo sapiens
ACAGTCCACCCCTT

AAGGGGTGGACTGT
ChIP-seq
Najafabadi et al.(2015b)
ZNF684
0.766 0.903
ZNF684
M08297_2.00
Homo sapiens
ACAGTCCACCCCTTB

VAAGGGGTGGACTGT
ChIP-seq
Schmitges et al.(2016)
Q5T5D7.MEME
0.766 0.903
ZNF684
M04429_2.00
Homo sapiens
DBACAGTCCACCCCTTDR

YHAAGGGGTGGACTGTVH
SELEX
Yin et al.(2017)
ZNF684_FL_Methyl-HT-SELEX
0.766 0.903
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000000691-D1 C2H2 ZF 163 180
ENSBTAP00000000691-D1 C2H2 ZF 191 213
ENSBTAP00000000691-D1 C2H2 ZF 219 241
ENSBTAP00000000691-D1 C2H2 ZF 247 269
ENSBTAP00000000691-D1 C2H2 ZF 275 297
ENSBTAP00000000691-D1 C2H2 ZF 303 325
ENSBTAP00000000691-D1 C2H2 ZF 332 353
ENSBTAP00000000691-D1 C2H2 ZF 359 381

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

Invalid Input OrderBy

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action