CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSBTAP00000000691-D1
(
Bos grunniens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
ENSBTAP00000000691-D1
T134484_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF684
M04428_2.00
Homo sapiens
NBACAGTCCACCCCTTDV
BHAAGGGGTGGACTGTVN
SELEX
Yin et al.(2017)
ZNF684_FL_HT-SELEX
0.766
0.903
ZNF684
M07574_2.00
Homo sapiens
CWCCCCTTK
MAAGGGGWG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF684.RCADE.ReprocessedData
0.766
0.903
ZNF684
M08240_2.00
Homo sapiens
ACAGTCCACCCCTT
AAGGGGTGGACTGT
ChIP-seq
Najafabadi et al.(2015b)
ZNF684
0.766
0.903
ZNF684
M08297_2.00
Homo sapiens
ACAGTCCACCCCTTB
VAAGGGGTGGACTGT
ChIP-seq
Schmitges et al.(2016)
Q5T5D7.MEME
0.766
0.903
ZNF684
M04429_2.00
Homo sapiens
DBACAGTCCACCCCTTDR
YHAAGGGGTGGACTGTVH
SELEX
Yin et al.(2017)
ZNF684_FL_Methyl-HT-SELEX
0.766
0.903
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000000691-D1
C2H2 ZF
163
180
DECNECGKAFKKKFNFIR
ENSBTAP00000000691-D1
C2H2 ZF
191
213
FECNNCGKAYSSKAHLATHQKIH
ENSBTAP00000000691-D1
C2H2 ZF
219
241
FVCSDCGKAFTHKAQLVVHQRLH
ENSBTAP00000000691-D1
C2H2 ZF
247
269
YECSQCGKSFTWNSSFNQHMKSH
ENSBTAP00000000691-D1
C2H2 ZF
275
297
FECKECGKTFRYSSSLYKHSKFH
ENSBTAP00000000691-D1
C2H2 ZF
303
325
YQCIVCGKAFGNSSVLVTHQRIH
ENSBTAP00000000691-D1
C2H2 ZF
332
353
GCIKCGKAFIKKSHLLRHQITH
ENSBTAP00000000691-D1
C2H2 ZF
359
381
YECSKCGKPFSQKSNLIVHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Bos grunniens
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy