ENSBTAP00000026911-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000026911-D1 T134616_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF263
M04386_2.00
Homo sapiens
VGTSCTCCCN

NGGGAGSACB
SELEX
Yin et al.(2017)
ZNF263_eDBD_HT-SELEX
0.817 0.961
ZNF263
M07563_2.00
Homo sapiens
STCCTCCCB

VGGGAGGAS
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF263.RCADE.ReprocessedData
0.817 0.961
ZNF263
M08082_2.00
Homo sapiens
YYYYCYYYYYYYYCCTCCTYC

GRAGGAGGRRRRRRRRGRRRR
ChIP-seq
Mathelier et al.(2014)
MA0528.1
0.817 0.961
ZNF263
M07843_2.00
Homo sapiens
YYBYYBYYVBBVSTSCTCCYY

RRGGAGSASBVVBRRVRRVRR
ChIP-seq
Gerstein et al.(2012)
K562b_ZNF263_UCD
0.817 0.961
ZNF263
M07844_2.00
Homo sapiens
NYYSNBMSTCCTCCY

RGGAGGASKVNSRRN
ChIP-seq
Gerstein et al.(2012)
T-REx-HEK293_ZNF263_UCD
0.817 0.961
ZNF263
M08272_2.00
Homo sapiens
YBNNNNDBVSTSCTCCYHVYN

NRBDRGGAGSASBVHNNNNVR
ChIP-seq
Schmitges et al.(2016)
O14978.MEME
0.817 0.961
ZNF263
M08851_2.00
Homo sapiens
YYBYYYYYCBBVSTCCTCCC

GGGAGGASBVVGRRRRRVRR
Misc
Kulakovskiy et al.(2013)
ZN263_HUMAN.H11MO.0.A
0.817 0.961
ZNF263
M10099_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FPM315_01
0.817 0.961
ZNF263
M10100_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF263_01
0.817 0.961
ZNF263
M04387_2.00
Homo sapiens
VGTSCTCCCN

NGGGAGSACB
SELEX
Yin et al.(2017)
ZNF263_eDBD_Methyl-HT-SELEX
0.817 0.961
Zfp263
M00766_2.00
Mus musculus
GTSMTCCB

VGGAKSAC
PBM
Weirauch et al.(2013)
pTH2682
0.801 0.937
Q8K439_MOUSE
M10382_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NT2_01
0.801 0.937
Q8K439_MOUSE
M10383_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NT2_02
0.801 0.937
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000026911-D1 C2H2 ZF 381 403
ENSBTAP00000026911-D1 C2H2 ZF 437 459
ENSBTAP00000026911-D1 C2H2 ZF 465 487
ENSBTAP00000026911-D1 C2H2 ZF 493 515
ENSBTAP00000026911-D1 C2H2 ZF 521 543
ENSBTAP00000026911-D1 C2H2 ZF 579 601
ENSBTAP00000026911-D1 C2H2 ZF 607 629
ENSBTAP00000026911-D1 C2H2 ZF 635 657
ENSBTAP00000026911-D1 C2H2 ZF 663 685

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O5_02795 Cladophialophora psammophila A1O5_02795 N 0.000
PV07_00856 Cladophialophora immunda PV07_00856 N 0.000
Z519_07327 Cladophialophora bantiana Z519_07327 N 0.000