CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R001028
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R001028
T135656_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R001028
C2H2 ZF
27
49
FACSLCPFVTHYPNHLARHMKTH
Gfo_R001028
C2H2 ZF
55
77
FACPLCPYASAHLDNLKRHQRVH
Gfo_R001028
C2H2 ZF
83
105
YKCQLCDYACGNLANLKRHGRIH
Gfo_R001028
C2H2 ZF
111
133
FQCSLCSYSCNQSMNLKRHMLRH
Gfo_R001028
C2H2 ZF
139
161
FQCRDCSYTTGHWDNYKRHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pvit_16548
Pogona vitticeps
Pvit_16548
N
0.794
ZNF513
Erinaceus europaeus
ENSEEUG00000008819
N
0.774