Gfo_R003803 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R003803 T135696_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HIVEP2
M10101_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MIBP1_Q6
0.825 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R003803 C2H2 ZF 189 211
Gfo_R003803 C2H2 ZF 217 239
Gfo_R003803 C2H2 ZF 1817 1839
Gfo_R003803 C2H2 ZF 1845 1869

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

199 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HIVEP2 Taeniopygia guttata ENSTGUG00000010974 I 0.827
Alligator_sinensis_CCG015583.1 Alligator sinensis Alligator_sinensis_CCG015583.1 I 0.827
Afo_R014870 Aptenodytes forsteri Afo_R014870 I 0.827
HIVEP2 Monodelphis domestica ENSMODG00000017268 I 0.827
Aan_R009807 Calypte anna Aan_R009807 I 0.827
ENSFALG00000012744 Ficedula albicollis ENSFALG00000012744 I 0.827
Brh_R013551 Buceros rhinoceros Brh_R013551 I 0.827
HIVEP2 Dasypus novemcinctus ENSDNOG00000049597 I 0.827
HIVEP2 Ornithorhynchus anatinus ENSOANG00000007666 I 0.827
Cmyd_10012369 Chelonia mydas Cmyd_10012369 I 0.827
ENSSHAG00000008159 Sarcophilus harrisii ENSSHAG00000008159 I 0.827
HIVEP2 Gallus gallus ENSGALG00000013795 I 0.827
HIVEP2 Ochotona princeps ENSOPRG00000015623 I 0.827
ENSPSIG00000009360 Pelodiscus sinensis ENSPSIG00000009360 I 0.827
hivep2 Xenopus tropicalis XB-GENE-485854 I 0.827
Tal_R004673 Tyto alba Tal_R004673 I 0.827
HIVEP2 Meleagris gallopavo ENSMGAG00000012956 I 0.827
ENSAPLG00000015149 Anas platyrhynchos ENSAPLG00000015149 I 0.827
Hivep2 Mus musculus ENSMUSG00000015501 I 0.825
HIVEP2 Tursiops truncatus ENSTTRG00000015014 I 0.825
HIVEP2 Loxodonta africana ENSLAFG00000009644 I 0.825
ENSBTAP00000001526-D1 Bos grunniens ENSBTAP00000001526-D1 I 0.825
ENSTSYG00000001970 Tarsius syrichta ENSTSYG00000001970 I 0.825
ENSP00000012134 Macaca fascicularis ENSP00000012134 I 0.825
HIVEP2 Equus caballus ENSECAG00000009836 I 0.825
HIVEP2 Erinaceus europaeus ENSEEUG00000013365 I 0.825
ENSVPAG00000003809 Vicugna pacos ENSVPAG00000003809 I 0.825
HIVEP2 Felis catus ENSFCAG00000030851 I 0.825
HIVEP2 Homo sapiens ENSG00000010818 D 0.825
HIVEP2 Gorilla gorilla ENSGGOG00000016466 I 0.825
HIVEP2 Myotis lucifugus ENSMLUG00000001764 I 0.825
ENSMICG00000016732 Microcebus murinus ENSMICG00000016732 I 0.825
ENSMPUG00000018042 Mustela putorius furo ENSMPUG00000018042 I 0.825
HIVEP2 Macaca mulatta ENSMMUG00000007998 I 0.825
Hivep2 Dipodomys ordii ENSDORG00000004767 I 0.825
ENSSTOG00000028355 Ictidomys tridecemlineatus ENSSTOG00000028355 I 0.825
ENSAMEG00000011648 Ailuropoda melanoleuca ENSAMEG00000011648 I 0.825
HIVEP2 Callithrix jacchus ENSCJAG00000019190 I 0.825
HIVEP2 Cavia porcellus ENSCPOG00000005191 I 0.825
HIVEP2 Procavia capensis ENSPCAG00000007184 I 0.825
HIVEP2 Canis familiaris ENSCAFG00000000300 I 0.825
HIVEP2 Pteropus vampyrus ENSPVAG00000012091 I 0.825
ENSPANG00000026003 Papio anubis ENSPANG00000026003 I 0.825
ENSPPYG00000017057 Pongo abelii ENSPPYG00000017057 I 0.825
HIVEP2 Bos taurus ENSBTAG00000001146 I 0.825
Hivep2 Rattus norvegicus ENSRNOG00000011015 I 0.825
HIVEP2 Pan troglodytes ENSPTRG00000018665 I 0.825
ENSNLEG00000015066 Nomascus leucogenys ENSNLEG00000015066 I 0.825
HIVEP2 Sus scrofa ENSSSCG00000004138 I 0.825
HIVEP2 Otolemur garnettii ENSOGAG00000017073 I 0.825
ENSOARG00000001505 Ovis aries ENSOARG00000001505 I 0.825
Myotis_brandtii_HIVEP2_10035753 Myotis brandtii Myotis_brandtii_HIVEP2_10035753 I 0.825
ENSCSAG00000017065 Chlorocebus sabaeus ENSCSAG00000017065 I 0.825
HIVEP2 Oryctolagus cuniculus ENSOCUG00000005139 I 0.825
ENSGMOG00000003043 Gadus morhua ENSGMOG00000003043 I 0.822
ENSLOCG00000000567 Lepisosteus oculatus ENSLOCG00000000567 I 0.822
hivep2a Gasterosteus aculeatus ENSGACG00000011974 I 0.822
hivep2a Danio rerio ENSDARG00000039987 I 0.822
ENSONIG00000018691 Oreochromis niloticus ENSONIG00000018691 I 0.822
hivep2a Takifugu rubripes ENSTRUG00000015889 I 0.819
ENSAMXG00000010476 Astyanax mexicanus ENSAMXG00000010476 I 0.819
hivep2a Tetraodon nigroviridis ENSTNIG00000010718 I 0.819
hivep2a Oryzias latipes ENSORLG00000018133 I 0.819
Ogr06337 Ophisaurus gracilis Ogr06337 I 0.815
Pvit_17261 Pogona vitticeps Pvit_17261 I 0.815
ENSPFOG00000016971 Poecilia formosa ENSPFOG00000016971 I 0.810
ENSXMAG00000013507 Xiphophorus maculatus ENSXMAG00000013507 I 0.810
hivep2b Oryzias latipes ENSORLG00000008843 I 0.807
ENSLACG00000006616 Latimeria chalumnae ENSLACG00000006616 I 0.807
ENSGMOG00000012811 Gadus morhua ENSGMOG00000012811 I 0.805
Pvit_18524 Pogona vitticeps Pvit_18524 I 0.800
HIVEP3 Tursiops truncatus ENSTTRG00000005582 I 0.797
HIVEP3 Oryctolagus cuniculus ENSOCUG00000001203 I 0.797
ENSSHAG00000006346 Sarcophilus harrisii ENSSHAG00000006346 I 0.797
ENSCSAG00000001159 Chlorocebus sabaeus ENSCSAG00000001159 I 0.797
HIVEP3 Pan troglodytes ENSPTRG00000000603 I 0.797
ENSPPYG00000001475 Pongo abelii ENSPPYG00000001475 I 0.797
hivep3 Xenopus tropicalis XB-GENE-482557 I 0.797
ENSNLEG00000012279 Nomascus leucogenys ENSNLEG00000012279 I 0.797
ENSP00000361664 Macaca fascicularis ENSP00000361664 I 0.797
ENSCPOG00000014328 Cavia porcellus ENSCPOG00000014328 I 0.797
Myotis_brandtii_HIVEP3_10016763 Myotis brandtii Myotis_brandtii_HIVEP3_10016763 I 0.797
ENSAPLG00000010507 Anas platyrhynchos ENSAPLG00000010507 I 0.797
HIVEP3 Pteropus vampyrus ENSPVAG00000006103 I 0.797
ENSPANG00000010311 Papio anubis ENSPANG00000010311 I 0.797
HIVEP3 Bos taurus ENSBTAG00000020745 I 0.797
HIVEP3 Canis familiaris ENSCAFG00000002576 I 0.797
Hivep3 Mus musculus ENSMUSG00000028634 I 0.797
Ogr11119 Ophisaurus gracilis Ogr11119 I 0.797
ENSAMEG00000000518 Ailuropoda melanoleuca ENSAMEG00000000518 I 0.797
HIVEP3 Otolemur garnettii ENSOGAG00000028118 I 0.797
ENSP00000247584-D1 Bos grunniens ENSP00000247584-D1 I 0.797
HIVEP3 Gorilla gorilla ENSGGOG00000016974 I 0.797
HIVEP3 Myotis lucifugus ENSMLUG00000004675 I 0.797
HIVEP3 Dasypus novemcinctus ENSDNOG00000043199 I 0.797
ENSPSIG00000016202 Pelodiscus sinensis ENSPSIG00000016202 I 0.797
ENSMICG00000010424 Microcebus murinus ENSMICG00000010424 I 0.797
HIVEP3 Loxodonta africana ENSLAFG00000017582 I 0.797
HIVEP3 Meleagris gallopavo ENSMGAG00000000881 I 0.797
ENSLACG00000016032 Latimeria chalumnae ENSLACG00000016032 I 0.797
HIVEP3 Macaca mulatta ENSMMUG00000016215 I 0.797
HIVEP3 Gallus gallus ENSGALG00000027365 I 0.797
HIVEP3 Felis catus ENSFCAG00000014035 I 0.797
ENSMPUG00000014066 Mustela putorius furo ENSMPUG00000014066 I 0.797
ENSFALG00000001148 Ficedula albicollis ENSFALG00000001148 I 0.797
HIVEP3 Equus caballus ENSECAG00000018490 I 0.797
HIVEP3 Monodelphis domestica ENSMODG00000017330 I 0.797
HIVEP3 Homo sapiens ENSG00000127124 I 0.797
HIVEP3 Anolis carolinensis ENSACAG00000000262 I 0.797
ENSPFOG00000016130 Poecilia formosa ENSPFOG00000016130 I 0.795
ENSMEUG00000003500 Macropus eugenii ENSMEUG00000003500 I 0.795
hivep2b Tetraodon nigroviridis ENSTNIG00000019322 I 0.795
hivep2b Takifugu rubripes ENSTRUG00000007039 I 0.795
ENSONIG00000000567 Oreochromis niloticus ENSONIG00000000567 I 0.795
hivep2b Gasterosteus aculeatus ENSGACG00000011743 I 0.795
Hivep3 Rattus norvegicus ENSRNOG00000009341 I 0.795
HIVEP1 Pan troglodytes ENSPTRG00000017729 I 0.794
hivep1.S Xenopus laevis XB-GENE-865233 I 0.794
ENSP00000368698 Macaca fascicularis ENSP00000368698 I 0.794
HIVEP1 Sus scrofa ENSSSCG00000001049 I 0.794
HIVEP1 Tursiops truncatus ENSTTRG00000016828 I 0.794
ENSTSYG00000014008 Tarsius syrichta ENSTSYG00000014008 I 0.794
ENSP00000368698-D1 Bos grunniens ENSP00000368698-D1 I 0.794
ENSSHAG00000015534 Sarcophilus harrisii ENSSHAG00000015534 I 0.794
HIVEP1 Pteropus vampyrus ENSPVAG00000014003 I 0.794
HIVEP1 Sorex araneus ENSSARG00000006713 I 0.794
Myotis_brandtii_HIVEP1_10025408 Myotis brandtii Myotis_brandtii_HIVEP1_10025408 I 0.794
hivep1 Xenopus tropicalis XB-GENE-479002 I 0.794
ENSOARG00000014356 Ovis aries ENSOARG00000014356 I 0.794
HIVEP1 Felis catus ENSFCAG00000002227 I 0.794
ENSMPUG00000000674 Mustela putorius furo ENSMPUG00000000674 I 0.794
Hivep1 Mus musculus ENSMUSG00000021366 I 0.794
ENSNLEG00000000728 Nomascus leucogenys ENSNLEG00000000728 I 0.794
HIVEP1 Ornithorhynchus anatinus ENSOANG00000007196 I 0.794
ENSMEUG00000014160 Macropus eugenii ENSMEUG00000014160 I 0.794
HIVEP1 Dasypus novemcinctus ENSDNOG00000036467 I 0.794
HIVEP1 Equus caballus ENSECAG00000010759 I 0.794
HIVEP1 Erinaceus europaeus ENSEEUG00000008935 I 0.794
Hivep1 Dipodomys ordii ENSDORG00000012154 I 0.794
HIVEP1 Myotis lucifugus ENSMLUG00000016059 I 0.794
HIVEP1 Monodelphis domestica ENSMODG00000010547 I 0.794
HIVEP1 Echinops telfairi ENSETEG00000015103 I 0.794
ENSCSAG00000007502 Chlorocebus sabaeus ENSCSAG00000007502 I 0.794
HIVEP1 Bos taurus ENSBTAG00000001252 I 0.794
ENSPANG00000000913 Papio anubis ENSPANG00000000913 I 0.794
HIVEP1 Gorilla gorilla ENSGGOG00000016169 I 0.794
ENSAMEG00000002719 Ailuropoda melanoleuca ENSAMEG00000002719 I 0.794
ENSPPYG00000016236 Pongo abelii ENSPPYG00000016236 I 0.794
HIVEP1 Canis familiaris ENSCAFG00000009791 I 0.794
HIVEP1 Ochotona princeps ENSOPRG00000008394 I 0.794
HIVEP1 Oryctolagus cuniculus ENSOCUG00000012379 I 0.794
HIVEP1 Otolemur garnettii ENSOGAG00000012509 I 0.794
HIVEP1 Cavia porcellus ENSCPOG00000007524 I 0.794
HIVEP1 Homo sapiens ENSG00000095951 I 0.794
HIVEP1 Callithrix jacchus ENSCJAG00000005100 I 0.794
ENSXMAG00000015035 Xiphophorus maculatus ENSXMAG00000015035 I 0.793
ENSSTOG00000025109 Ictidomys tridecemlineatus ENSSTOG00000025109 I 0.789
ENSAMXG00000020146 Astyanax mexicanus ENSAMXG00000020146 I 0.788
ENSLOCG00000003625 Lepisosteus oculatus ENSLOCG00000003625 I 0.788
ENSOARG00000020378 Ovis aries ENSOARG00000020378 I 0.785
hivep3b Danio rerio ENSDARG00000037154 I 0.785
hivep2b Danio rerio ENSDARG00000018773 I 0.785
ENSLACG00000016748 Latimeria chalumnae ENSLACG00000016748 I 0.784
ENSXMAG00000010646 Xiphophorus maculatus ENSXMAG00000010646 I 0.783
ENSONIG00000006743 Oreochromis niloticus ENSONIG00000006743 I 0.783
ENSPFOG00000009215 Poecilia formosa ENSPFOG00000009215 I 0.783
hivep3b Takifugu rubripes ENSTRUG00000013983 I 0.783
hivep3b Tetraodon nigroviridis ENSTNIG00000009667 I 0.783
Gfo_R000665 Geospiza fortis Gfo_R000665 I 0.782
Cmyd_10012979 Chelonia mydas Cmyd_10012979 I 0.782
ENSTGUG00000005813 Taeniopygia guttata ENSTGUG00000005813 I 0.782
ENSAPLG00000012713 Anas platyrhynchos ENSAPLG00000012713 I 0.782
ENSPSIG00000004550 Pelodiscus sinensis ENSPSIG00000004550 I 0.782
Tal_R003271 Tyto alba Tal_R003271 I 0.782
Aan_R001556 Calypte anna Aan_R001556 I 0.782
HIVEP1 Gallus gallus ENSGALG00000012739 I 0.782
Brh_R013004 Buceros rhinoceros Brh_R013004 I 0.782
HIVEP1 Meleagris gallopavo ENSMGAG00000003391 I 0.782
Alligator_sinensis_CCG008980.1 Alligator sinensis Alligator_sinensis_CCG008980.1 I 0.782
Afo_R013233 Aptenodytes forsteri Afo_R013233 I 0.782
Pvit_07058 Pogona vitticeps Pvit_07058 I 0.780
HIVEP1 Anolis carolinensis ENSACAG00000008494 I 0.780
ENSMICG00000008358 Microcebus murinus ENSMICG00000008358 I 0.779
ENSPMAG00000003790 Petromyzon marinus ENSPMAG00000003790 I 0.773
hivep1 Oryzias latipes ENSORLG00000009270 I 0.772
ENSPFOG00000005423 Poecilia formosa ENSPFOG00000005423 I 0.772
ENSAMXG00000017196 Astyanax mexicanus ENSAMXG00000017196 I 0.772
BGIBMGA003672 Bombyx mori BGIBMGA003672 I 0.772
hivep1 Danio rerio ENSDARG00000103658 I 0.772
hivep1 Takifugu rubripes ENSTRUG00000010871 I 0.772
ENSONIG00000013692 Oreochromis niloticus ENSONIG00000013692 I 0.772
hivep1 Tetraodon nigroviridis ENSTNIG00000004491 I 0.772
ENSXMAG00000016142 Xiphophorus maculatus ENSXMAG00000016142 I 0.772
ENSLOCG00000007963 Lepisosteus oculatus ENSLOCG00000007963 I 0.772
hivep1 Gasterosteus aculeatus ENSGACG00000002352 I 0.770
ENSGMOG00000011398 Gadus morhua ENSGMOG00000011398 I 0.770
hivep3a Danio rerio ENSDARG00000075928 I 0.768
ENSAMXG00000000689 Astyanax mexicanus ENSAMXG00000000689 I 0.768
BGLB001623 Biomphalaria glabrata BGLB001623 I 0.764