CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R006343
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R006343
T135740_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R006343
C2H2 ZF
124
146
YVCELCQKTFKTASILKAHMITH
Gfo_R006343
C2H2 ZF
152
174
YECKLCGTSFRTKGSLIRHHRRH
Gfo_R006343
C2H2 ZF
180
201
YKCKNCGKSFRESGALTRHLKS
Gfo_R006343
C2H2 ZF
365
387
YICSHCNEAFSEAAALETHSKSH
Gfo_R006343
C2H2 ZF
393
415
FKCEECGKEFTKGYLLKKHQEVH
Gfo_R006343
C2H2 ZF
421
443
FRCGECGKLYKTIAHVKGHRRVH
Gfo_R006343
C2H2 ZF
449
471
YACPKCGKRYKTKNAQQVHFRTH
Gfo_R006343
C2H2 ZF
477
499
YVCQFCSRGFREKGSLVRHIRHH
Gfo_R006343
C2H2 ZF
505
526
FRCYKCGRGFAEHGTLNRHLRT
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy