Gfo_R009598 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R009598 T135802_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R009598 C2H2 ZF 44 66
Gfo_R009598 C2H2 ZF 75 97
Gfo_R009598 C2H2 ZF 101 123
Gfo_R009598 C2H2 ZF 129 151
Gfo_R009598 C2H2 ZF 157 178

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
snai1.S Xenopus laevis XB-GENE-865328 I 0.808
snai1 Xenopus tropicalis XB-GENE-479970 I 0.811
ENSLACG00000017707 Latimeria chalumnae ENSLACG00000017707 I 0.811
Cmyd_10017446 Chelonia mydas Cmyd_10017446 I 0.813
Alligator_sinensis_CCG001703.1 Alligator sinensis Alligator_sinensis_CCG001703.1 I 0.808
ENSPSIG00000003607 Pelodiscus sinensis ENSPSIG00000003607 I 0.813
Pvit_03333 Pogona vitticeps Pvit_03333 N 0.813
Ogr08528 Ophisaurus gracilis Ogr08528 N 0.813
Afo_R003266 Aptenodytes forsteri Afo_R003266 N 0.827
Aan_R003278 Calypte anna Aan_R003278 N 0.827
SNAI1 Taeniopygia guttata ENSTGUG00000008724 N 0.827
SNAI1 Ornithorhynchus anatinus ENSOANG00000008681 N 0.813
SNAI1 Meleagris gallopavo ENSMGAG00000009447 N 0.827
SNAI1 Gallus gallus ENSGALG00000008018 N 0.827
ENSFALG00000012974 Ficedula albicollis ENSFALG00000012974 N 0.827
ENSAPLG00000014633 Anas platyrhynchos ENSAPLG00000014633 N 0.827
SNAI1 Anolis carolinensis ENSACAG00000015607 N 0.813