CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R010703
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R010703
T135814_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R010703
C2H2 ZF
114
136
YPCQFCDKSFIRLSYLKRHEQIH
Gfo_R010703
C2H2 ZF
142
164
FKCTYCSRLFKHKRSRDRHIKLH
Gfo_R010703
C2H2 ZF
170
192
YHCHECEAAFSRSDHLKIHLKTH
Gfo_R010703
C2H2 ZF
198
220
FKCTVCKRGFSSTSSLQSHMQAH
Gfo_R010703
C2H2 ZF
239
262
FMCDYCEETFSQTEDLEKHVMTRH
Gfo_R010703
C2H2 ZF
271
294
LQCIHCPEVFVDENLLLSHIHQAH
Gfo_R010703
C2H2 ZF
460
483
FHCNYCPEMFADINSLQEHIRITH
Gfo_R010703
C2H2 ZF
497
520
FFCNQCSMGFLTEATLTEHIQQTH
Gfo_R010703
C2H2 ZF
543
568
YSCPYCTNSPIFGSILKLTKHIKENH
Gfo_R010703
C2H2 ZF
612
634
YPCNQCDLKFSNFESFQTHLKLH
Gfo_R010703
C2H2 ZF
642
664
QSCPQCKEDFDSQESLLQHLTVH
Gfo_R010703
C2H2 ZF
672
695
YVCESCDKQFSSVDDLQKHLLDMH
Gfo_R010703
C2H2 ZF
700
723
YHCTLCQEVFDSKVSIQVHLAVKH
Gfo_R010703
C2H2 ZF
730
753
YRCTACNWDFRKEVDLQIHVKHSH
Gfo_R010703
C2H2 ZF
787
810
YNCKFCSKAFHAIILLEKHLREKH
Gfo_R010703
C2H2 ZF
865
888
YGCDICGAAYTMEVLLQNHRLRDH
Gfo_R010703
C2H2 ZF
909
931
HKCNICSRTFFSENGLREHMQTH
Gfo_R010703
C2H2 ZF
938
960
YMCPICGERFPSLLTLTEHKVTH
Gfo_R010703
C2H2 ZF
1208
1231
FKCPVCFTVFVQANKLQQHIFAVH
Gfo_R010703
C2H2 ZF
1238
1261
YDCSQCPQKFFFQTELQNHTLSQH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy