CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R015097
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R015097
T135867_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R015097
C2H2 ZF
127
149
YQCGLCNFLSPSLLTLQEHIKQH
Gfo_R015097
C2H2 ZF
157
180
LMCSECHFASKSQEELESHFQNHH
Gfo_R015097
C2H2 ZF
641
663
YRCRLCHYSSGNKGYIKQHLRVH
Gfo_R015097
C2H2 ZF
669
691
YQCPICEHIAGDSKGLESHMINH
Gfo_R015097
C2H2 ZF
697
720
YQCKQCEESFHYKSQLRNHEREQH
Gfo_R015097
C2H2 ZF
761
783
FRCDVCDYTSTTYVGVRNHRRIH
Gfo_R015097
C2H2 ZF
789
811
YRCSLCGYVCSHPPSLKSHMWKH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF507
Taeniopygia guttata
ENSTGUG00000009020
N
0.824
Tal_R010258
Tyto alba
Tal_R010258
N
0.794
ENSAPLG00000013158
Anas platyrhynchos
ENSAPLG00000013158
N
0.762