Pvit_01837 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_01837 T136878_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL6
M00228_2.00 		Homo sapiens
NNVNDVRANN
NNTYBHNBNN		 PBM
Barrera et al.(2016)
BCL6_REF 		0.789 0.971
BCL6
M04424_2.00 		Homo sapiens
NYGCTTTCKAGGAAHN
NDTTCCTMGAAAGCRN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_1 		0.789 0.971
BCL6
M04425_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_2 		0.789 0.971
Bcl6
M08097_2.00 		Mus musculus
NDCYYTCYAGGAAN
NTTCCTRGARRGHN		 ChIP-seq
Mathelier et al.(2014)
MA0463.1 		0.789 0.971
Bcl6
M08024_2.00 		Mus musculus
HYNBHHWBWSHTCHYNYYYYYYNBYYHYYH
DRRDRRVNRRRRRRNRDGADSWVWDDVNRD		 ChIP-seq
Chen et al.(2011)
SRP001843_Bcl6_IgG_LPSstim 		0.789 0.971
BCL6
M08877_2.00 		Homo sapiens
NNMYYTCYAGGAA
TTCCTRGARRKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_HUMAN.H11MO.0.A 		0.789 0.971
Bcl6
M08972_2.00 		Mus musculus
NNMTYTCYAGGAA
TTCCTRGARAKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_MOUSE.H11MO.0.A 		0.789 0.971
Bcl6
M09513_2.00 		Mus musculus
NNNNYTTCYWGGAAN
NTTCCWRGAARNNNN		 Misc
Heinz et al.(2010)
Liver-Bcl6_GSE31578 		0.789 0.971
BCL6
M10180_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_01 		0.789 0.971
BCL6
M10181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_02 		0.789 0.971
BCL6
M10182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3_01 		0.789 0.971
BCL6
M10183_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3 		0.789 0.971
BCL6
M10184_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q6 		0.789 0.971
BCL6
M04426_2.00 		Homo sapiens
NTGCTTTCTAGGAAHN
NDTTCCTAGAAAGCAN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_1 		0.789 0.971
BCL6
M04427_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_2 		0.789 0.971
BCL6
M00227_2.00 		Homo sapiens
NTAATTRWNN
NNWYAATTAN		 PBM
Barrera et al.(2016)
BCL6_H676Y 		0.782 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_01837 C2H2 ZF 422 445
Pvit_01837 C2H2 ZF 450 472
Pvit_01837 C2H2 ZF 478 500
Pvit_01837 C2H2 ZF 506 528
Pvit_01837 C2H2 ZF 534 556
Pvit_01837 C2H2 ZF 562 585

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BCL6 Anolis carolinensis ENSACAG00000006666 I 0.825
ENSPPYG00000014395 Pongo abelii ENSPPYG00000014395 I 0.789
ENSPSIG00000014529 Pelodiscus sinensis ENSPSIG00000014529 I 0.789
Bcl6 Rattus norvegicus ENSRNOG00000001843 I 0.789
ENSPANG00000017677 Papio anubis ENSPANG00000017677 I 0.789
BCL6 Pan troglodytes ENSPTRG00000015728 I 0.789
BCL6 Ochotona princeps ENSOPRG00000005797 I 0.789
ENSNLEG00000006705 Nomascus leucogenys ENSNLEG00000006705 I 0.789
Bcl6 Mus musculus ENSMUSG00000022508 D 0.789
BCL6 Ornithorhynchus anatinus ENSOANG00000000872 I 0.789
BCL6 Oryctolagus cuniculus ENSOCUG00000005429 I 0.789
BCL6 Otolemur garnettii ENSOGAG00000007638 I 0.789
ENSSHAG00000013935 Sarcophilus harrisii ENSSHAG00000013935 I 0.789
BCL6 Sus scrofa ENSSSCG00000011810 I 0.789
ENSBTAP00000001978-D1 Bos grunniens ENSBTAP00000001978-D1 I 0.789
ENSP00000384371 Macaca fascicularis ENSP00000384371 I 0.789
Myotis_brandtii_BCL6_10016106 Myotis brandtii Myotis_brandtii_BCL6_10016106 I 0.789
Tal_R005794 Tyto alba Tal_R005794 I 0.789
Cmyd_10010560 Chelonia mydas Cmyd_10010560 I 0.789
Brh_R006050 Buceros rhinoceros Brh_R006050 I 0.789
BCL6 Tursiops truncatus ENSTTRG00000017230 I 0.789
Aan_R013387 Calypte anna Aan_R013387 I 0.789
Afo_R010236 Aptenodytes forsteri Afo_R010236 I 0.789
Alligator_sinensis_CCG010229.1 Alligator sinensis Alligator_sinensis_CCG010229.1 I 0.789
BCL6 Taeniopygia guttata ENSTGUG00000009413 I 0.789
ENSMPUG00000003415 Mustela putorius furo ENSMPUG00000003415 I 0.789
ENSCSAG00000009138 Chlorocebus sabaeus ENSCSAG00000009138 I 0.789
Bcl6 Dipodomys ordii ENSDORG00000005608 I 0.789
BCL6 Equus caballus ENSECAG00000004556 I 0.789
BCL6 Macaca mulatta ENSMMUG00000009198 I 0.789
BCL6 Cavia porcellus ENSCPOG00000004090 I 0.789
BCL6 Callithrix jacchus ENSCJAG00000014375 I 0.789
ENSAMEG00000000812 Ailuropoda melanoleuca ENSAMEG00000000812 I 0.789
BCL6 Bos taurus ENSBTAG00000001511 I 0.789
BCL6 Canis familiaris ENSCAFG00000013904 I 0.789
ENSFALG00000007407 Ficedula albicollis ENSFALG00000007407 I 0.789
BCL6 Erinaceus europaeus ENSEEUG00000000344 I 0.789
BCL6 Meleagris gallopavo ENSMGAG00000007602 I 0.789
BCL6 Felis catus ENSFCAG00000006810 I 0.789
BCL6 Loxodonta africana ENSLAFG00000012300 I 0.789
BCL6 Gorilla gorilla ENSGGOG00000026549 I 0.789
BCL6 Microcebus murinus ENSMICG00000001780 I 0.789
BCL6 Myotis lucifugus ENSMLUG00000012905 I 0.789
BCL6 Homo sapiens ENSG00000113916 D 0.789
BCL6 Gallus gallus ENSGALG00000007357 I 0.789
ENSMEUG00000004411 Macropus eugenii ENSMEUG00000004411 I 0.789
bcl6a Danio rerio ENSDARG00000070864 N 0.787
ENSLOCG00000005212 Lepisosteus oculatus ENSLOCG00000005212 N 0.787
Gfo_R004424 Geospiza fortis Gfo_R004424 I 0.782
BCL6 Dasypus novemcinctus ENSDNOG00000004306 I 0.781
BCL6 Echinops telfairi ENSETEG00000014830 I 0.778
bcl6a Tetraodon nigroviridis ENSTNIG00000013771 N 0.764
ENSAPLG00000015868 Anas platyrhynchos ENSAPLG00000015868 I 0.759