CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pvit_11533
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_11533
T137295_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.769
0.938
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.769
0.938
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.769
0.938
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.769
0.938
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_11533
C2H2 ZF
315
339
ACRWIDCSAAYDQQDELVRHIEKTH
Pvit_11533
C2H2 ZF
348
375
FTCFWTGCVRRYKPFNARYKLLIHMRVH
Pvit_11533
C2H2 ZF
382
405
KCMFEGCNKAFSRLENLKIHLRSH
Pvit_11533
C2H2 ZF
411
435
YLCQHPGCQKAFSNSSDRAKHQRTH
Pvit_11533
C2H2 ZF
441
465
YACQIPGCAKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy