Pvit_18935 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_18935 T137532_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB49
M02901_2.00 		Homo sapiens
TTYYGCYTGRCVBGTCA
TGACVBGYCARGCRRAA		 SELEX
Jolma et al.(2013)
ZBTB49_1 		0.779 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_18935 C2H2 ZF 423 445
Pvit_18935 C2H2 ZF 451 473
Pvit_18935 C2H2 ZF 479 501
Pvit_18935 C2H2 ZF 507 529
Pvit_18935 C2H2 ZF 535 557
Pvit_18935 C2H2 ZF 563 585
Pvit_18935 C2H2 ZF 591 613

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

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40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action