CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AAE_estExt_fgenesh1_pg.C_chr_120283
(
Mycosphaerella graminicola
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
AAE_estExt_fgenesh1_pg.C_chr_120283
T137812_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU07952
M01890_2.00
Neurospora crassa
YWNMGCCHY
RDGGCKNWR
PBM
Weirauch et al.(2014)
pTH9003
0.784
0.897
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAE_estExt_fgenesh1_pg.C_chr_120283
C2H2 ZF
528
550
FQCTLCPKRFTRAYNLRSHLRTH
AAE_estExt_fgenesh1_pg.C_chr_120283
C2H2 ZF
556
578
FVCTVCGKAFARQHDRKRHEGLH
AAE_estExt_fgenesh1_pg.C_chr_120283
C2H2 ZF
584
614
FVCRGVLQGGSSWGCGRRFARADALGRHFRS
Links
Other
C2H2 ZF
family TFs
Other
Mycosphaerella graminicola
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy