CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.3.365.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.3.365.1
T138203_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.3.365.1
C2H2 ZF
1
22
KCPYCQYLAMKSSHLKRHVRKH
e_gw.3.365.1
C2H2 ZF
28
51
FKCPHCKYSAMRKEHLLRHFGFKH
e_gw.3.365.1
C2H2 ZF
57
80
VSCRECRYRTTDEESLNVHLKLSH
e_gw.3.365.1
C2H2 ZF
88
110
YKCRQCEFESPRKSQYVEHTKVH
e_gw.3.365.1
C2H2 ZF
113
135
WECPICKYSTQDWMTYRQHKRSH
e_gw.3.365.1
C2H2 ZF
141
163
YTCPMCTYTAKLKVDLERHIRAH
e_gw.3.365.1
C2H2 ZF
169
191
FTCPQCSYRGARKDSLIRHMRTH
e_gw.3.365.1
C2H2 ZF
197
219
YKCPLCDFASAQQGHLVTHIRTH
e_gw.3.365.1
C2H2 ZF
225
247
FTCPCCDYACCDRSSLVKHVRIH
e_gw.3.365.1
C2H2 ZF
253
275
YKCPHCPFAAIRNQDLKDHINIH
e_gw.3.365.1
C2H2 ZF
281
303
YKCTQCLYAAADRSTLRTHTKKH
e_gw.3.365.1
C2H2 ZF
337
359
FKCSECDYTTSNKACLKRHQKQH
e_gw.3.365.1
C2H2 ZF
364
386
LSCKMCDLEFNKQQELITHIATH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.3.366.1
Branchiostoma floridae
e_gw.3.366.1
N
0.812