CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.438.2.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.438.2.1
T138282_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.438.2.1
C2H2 ZF
1
21
CPTCDKPFKGMGELRQHFRTH
e_gw.438.2.1
C2H2 ZF
27
49
YECPVCKARFIQQGHLSGHMKLH
e_gw.438.2.1
C2H2 ZF
57
80
YRCNYCDKVCSSTCNMKQHIRTHH
e_gw.438.2.1
C2H2 ZF
86
103
YECDVCGAKFKQRATFLT
e_gw.438.2.1
C2H2 ZF
117
140
YKCDNCGASFVKLHALSRHIRKMH
e_gw.438.2.1
C2H2 ZF
148
171
STCELCDKTFPRPAMMRVHMQTDH
e_gw.438.2.1
C2H2 ZF
177
199
FGCSECDMTFPTVGRLNKHKEIH
e_gw.438.2.1
C2H2 ZF
207
229
YQCEICGKMYLTKAGLNNHTRHH
e_gw.438.2.1
C2H2 ZF
235
257
YACDQCDAKFAESNSLKVHKLRH
e_gw.438.2.1
C2H2 ZF
263
285
FLCDVCGAAFTYPNSLKTHKLLH
e_gw.438.2.1
C2H2 ZF
291
313
YECKECGKRYHNQSALIRHVKLH
e_gw.438.2.1
C2H2 ZF
319
341
FVCPDCGKGFVYHGEMTRHRRIH
e_gw.438.2.1
C2H2 ZF
347
369
FVCDVCGSAFCYSSQLREHKKIH
e_gw.438.2.1
C2H2 ZF
375
397
HQCDFCKRRFRASNQLKRHRYTH
e_gw.438.2.1
C2H2 ZF
403
425
HVCDICGKGYTRSDKLKDHKKQH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw.438.80.1
Branchiostoma floridae
gw.438.80.1
N
0.783