CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw.52.14.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.52.14.1
T138313_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.52.14.1
C2H2 ZF
15
34
DQCNQQFSQLSHLNTHIKTH
e_gw.52.14.1
C2H2 ZF
40
62
YMCDECSKKFRTLSNLKIHIRKH
e_gw.52.14.1
C2H2 ZF
68
90
YRCIECKRNFASLNVLKIHMRIH
e_gw.52.14.1
C2H2 ZF
96
118
YKCETCKACFTQLVHLKDHIRTH
e_gw.52.14.1
C2H2 ZF
124
146
YKCKCCSRQFRHSNVLVTHMRIH
e_gw.52.14.1
C2H2 ZF
152
174
YGCKYCGKTFCQSTQLKVHIRKH
e_gw.52.14.1
C2H2 ZF
180
202
YICDNCIKQFTTLSNLKRHLRIH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.85.10.1
Branchiostoma floridae
e_gw.85.10.1
N
0.821
fgenesh2_pm.scaffold_564000001
Branchiostoma floridae
fgenesh2_pm.scaffold_564000001
N
0.809