estExt_Genewise1.C_40689 (Cochliobolus heterostrophus C5)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_Genewise1.C_40689 T138846_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN

NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
0.803 0.899
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH

DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
0.803 0.899
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN

NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.802 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_40689 C2H2 ZF 365 390
estExt_Genewise1.C_40689 C2H2 ZF 396 425
estExt_Genewise1.C_40689 C2H2 ZF 430 456

Links

Other C2H2 ZF family TFs
Other Cochliobolus heterostrophus C5 TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N 0.000
mgf025428m Mimulus guttatus mgf025428m N 0.000
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N 0.000
30005.m001261 Ricinus communis 30005.m001261 N 0.000
Cla012999 Citrullus lanatus Cla012999 N 0.000
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N 0.000
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N 0.000
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N 0.000
TCM_002550 Theobroma cacao TCM_002550 N 0.000
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N 0.000
Aquca_108_00051 Aquilegia coerulea Aquca_108_00051 N 0.000
Ciclev10016354m.g Citrus clementina Ciclev10016354m.g N 0.000
Pavir.J08977 Panicum virgatum Pavir.J08977 N 0.000
Pavir.Ga01503 Panicum virgatum Pavir.Ga01503 N 0.000
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N 0.000
Lus10027045.g Linum usitatissimum Lus10027045.g N 0.000
Lus10025582.g Linum usitatissimum Lus10025582.g N 0.000
Lus10025581.g Linum usitatissimum Lus10025581.g N 0.000
Gorai.N001000 Gossypium raimondii Gorai.N001000 N 0.000
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N 0.000
Gorai.004G060500 Gossypium raimondii Gorai.004G060500 N 0.000
Si010917m.g Setaria italica Si010917m.g N 0.000
Sb06g021360 Sorghum bicolor Sb06g021360 N 0.000
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N 0.000
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N 0.000
GRMZM2G053557 Zea mays GRMZM2G053557 N 0.000
F775_32546 Aegilops tauschii F775_32546 N 0.000
Bra040015 Brassica rapa Bra040015 N 0.000
Bra029658 Brassica rapa Bra029658 N 0.000
Bra001258 Brassica rapa Bra001258 N 0.000
Bo3g061340 Brassica oleracea Bo3g061340 N 0.000
Bo1g147290 Brassica oleracea Bo1g147290 N 0.000
GSMUA_Achr9G08210_001 Musa acuminata GSMUA_Achr9G08210_001 N 0.000
LPERR04G13890 Leersia perrieri LPERR04G13890 N 0.000
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N 0.000
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N 0.000
ORUFI04G18740 Oryza rufipogon ORUFI04G18740 N 0.000
ORGLA04G0144300 Oryza glaberrima ORGLA04G0144300 N 0.000
OPUNC04G15120 Oryza punctata OPUNC04G15120 N 0.000
ONIVA04G15620 Oryza nivara ONIVA04G15620 N 0.000
OMERI04G14610 Oryza meridionalis OMERI04G14610 N 0.000
OGLUM04G17350 Oryza glumaepatula OGLUM04G17350 N 0.000
OBART04G17310 Oryza barthii OBART04G17310 N 0.000
BGIOSGA014805 Oryza indica BGIOSGA014805 N 0.000