estExt_Genewise1Plus.C_31872 (Neurospora discreta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_Genewise1Plus.C_31872 T138877_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NCU07952
M01890_2.00
Neurospora crassa
YWNMGCCHY

RDGGCKNWR
PBM
Weirauch et al.(2014)
pTH9003
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_31872 C2H2 ZF 490 512
estExt_Genewise1Plus.C_31872 C2H2 ZF 518 540
estExt_Genewise1Plus.C_31872 C2H2 ZF 547 577

Links

Other C2H2 ZF family TFs
Other Neurospora discreta TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29872.m000537 Ricinus communis 29872.m000537 N 0.000
BGIOSGA025964 Oryza indica BGIOSGA025964 N 0.000
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N 0.000
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N 0.000
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N 0.000
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N 0.000
Cla005525 Citrullus lanatus Cla005525 N 0.000
Cucsa.180010 Cucumis sativus Cucsa.180010 N 0.000
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N 0.000
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N 0.000
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N 0.000
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N 0.000
LPERR07G16410 Leersia perrieri LPERR07G16410 N 0.000
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.000
MDP0000269044 Malus domestica MDP0000269044 N 0.000
MDP0000287321 Malus domestica MDP0000287321 N 0.000
MDP0000289554 Malus domestica MDP0000289554 N 0.000
MLOC_62589 Hordeum vulgare MLOC_62589 N 0.000
OB07G24850 Oryza brachyantha OB07G24850 N 0.000
OBART07G19080 Oryza barthii OBART07G19080 N 0.000
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N 0.000
OLONG_002258 Oryza longistaminata OLONG_002258 N 0.000
OMERI07G15800 Oryza meridionalis OMERI07G15800 N 0.000
ONIVA07G17430 Oryza nivara ONIVA07G17430 N 0.000
OPUNC07G17970 Oryza punctata OPUNC07G17970 N 0.000
OPUNC07G18000 Oryza punctata OPUNC07G18000 N 0.000
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N 0.000
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N 0.000
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N 0.000
OS07G0567700 Oryza sativa OS07G0567700 N 0.000
Pavir.Ba00637 Panicum virgatum Pavir.Ba00637 N 0.000
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N 0.000
PK21090.1 Cannabis sativa PK21090.1 N 0.000
Pm014866 Prunus mume Pm014866 N 0.000
POPTR_0006s02220 Populus trichocarpa POPTR_0006s02220 N 0.000
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N 0.000
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N 0.000
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N 0.000
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N 0.000
Sb02g036680 Sorghum bicolor Sb02g036680 N 0.000
Si032551m.g Setaria italica Si032551m.g N 0.000
TCM_002021 Theobroma cacao TCM_002021 N 0.000
Traes_2AS_455BD2CA1 Triticum aestivum Traes_2AS_455BD2CA1 N 0.000
Traes_2BS_015167E00 Triticum aestivum Traes_2BS_015167E00 N 0.000
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N 0.000