fgenesh1_pm.sca_3_chr4_2_0000556 (Nectria haematococca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 fgenesh1_pm.sca_3_chr4_2_0000556 T139063_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU00285
M01869_2.00 		Neurospora crassa
NNRCCYDRN
NYHRGGYNN		 PBM
Weirauch et al.(2014)
pTH8803 		0.781 0.886
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_3_chr4_2_0000556 C2H2 ZF 324 350
fgenesh1_pm.sca_3_chr4_2_0000556 C2H2 ZF 362 390

Links

Other C2H2 ZF family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action