CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.C_scaffold_2000537
(
Neurospora discreta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.C_scaffold_2000537
T139070_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU02487
M01874_2.00
Neurospora crassa
NNNKYCCTDN
NHAGGRMNNN
PBM
Weirauch et al.(2014)
pTH8885
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.C_scaffold_2000537
C2H2 ZF
465
490
LSCHVPGCTKTFSRLDNLKKHKKDKH
Links
Other
C2H2 ZF
family TFs
Other
Neurospora discreta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEUTE1DRAFT_92273
Neurospora tetrasperma
NEUTE1DRAFT_92273
I
0.827
NCU02487
Neurospora crassa
NCU02487
D
0.827
SMAC_05983
Sordaria macrospora
SMAC_05983
I
0.817