fgenesh2_pg.scaffold_40000038 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 fgenesh2_pg.scaffold_40000038 T139536_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_40000038 C2H2 ZF 156 179
fgenesh2_pg.scaffold_40000038 C2H2 ZF 190 212
fgenesh2_pg.scaffold_40000038 C2H2 ZF 218 240
fgenesh2_pg.scaffold_40000038 C2H2 ZF 246 268
fgenesh2_pg.scaffold_40000038 C2H2 ZF 274 296

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_pg.C_1590064 Branchiostoma floridae estExt_fgenesh2_pg.C_1590064 N 0.825
fgenesh2_pg.scaffold_159000062 Branchiostoma floridae fgenesh2_pg.scaffold_159000062 N 0.822