CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_6000175
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_6000175
T139605_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_6000175
C2H2 ZF
339
361
FSCEFCSKVFKFRNGLVNHLRVH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
367
389
FKCDRCDYACAVKTNLKTHMRKH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
394
417
FHCQQCDYSSINKGHLKDHIATKH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
422
445
HPCEMCSSTYTTVRALVKHFREKH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
473
495
YICDLCNRKFKTRLDKERHVVLH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
501
523
FPCGLCEYSTNRQANLDLHIRKH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
735
757
MECRYCGRFFYYDKTLAQHERTH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
763
786
FACNECPYASATKEGLKRHIQGSH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
791
814
IKCEQCEFSTNNKYTLWRHTKKEH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
824
847
YTCPACSETFTKERAIKVHIKKHH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
874
894
FKCPYCGKLFRKKEPDLRKHI
fgenesh2_pg.scaffold_6000175
C2H2 ZF
903
925
FKCGLCTFACRSKSNLKAHMLRH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
931
954
HLCEECGKKFKTKQSLKFHSQQYH
fgenesh2_pg.scaffold_6000175
C2H2 ZF
964
986
YYCQICDYSGIQIAHLRRHMEQH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_pg.scaffold_349000060
Branchiostoma floridae
fgenesh2_pg.scaffold_349000060
N
0.827