CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.333.136.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.333.136.1
T140155_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.333.136.1
C2H2 ZF
1
23
FSCTVCPMSFTKLSALKRHLSTH
gw.333.136.1
C2H2 ZF
29
51
YQCSICSTRFRRISYLKNHMIIH
gw.333.136.1
C2H2 ZF
57
79
YKCNLCSAKFSQRATLFRHRAVH
gw.333.136.1
C2H2 ZF
85
107
YQCTSCPMKFNQRSSLVRHMLSH
gw.333.136.1
C2H2 ZF
113
136
FSCNQCHDKFTSEETLKEHIIKVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.444.69.1
Branchiostoma floridae
e_gw.444.69.1
N
0.827