CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw.370.42.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gw.370.42.1
T140165_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw.370.42.1
C2H2 ZF
33
57
FKCQYEGCSFTTAYNKDLDRHVRSH
gw.370.42.1
C2H2 ZF
63
85
FSCSVCQKAFNRRDKLKQHLRVH
gw.370.42.1
C2H2 ZF
91
113
YACSRCSYAAADSSSLKKHVRTH
gw.370.42.1
C2H2 ZF
119
141
FKCQICPYASRNSSQLIVHLRSH
gw.370.42.1
C2H2 ZF
147
169
FHCQLCEAKFKIKSDLKRHMRTH
gw.370.42.1
C2H2 ZF
175
198
YKCDLCDYRCAMKGNLKVHVRNNH
gw.370.42.1
C2H2 ZF
203
225
LSCPQCPQTFQNKAQLRAHLKTH
gw.370.42.1
C2H2 ZF
252
275
FKCQYCSFESRHAANVRNHTKKHH
gw.370.42.1
C2H2 ZF
318
340
FSCSICKESFVREDSLRSHMNQH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gw.69.162.1
Branchiostoma floridae
gw.69.162.1
N
0.827